Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx41Q91VN6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Gm38205-201ENSMUST00000192243 258 ntBASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ddx41Q91VN6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx41Q91VN6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx41Q91VN6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx41Q91VN6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx41Q91VN6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Ddx41Q91VN6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.58■■□□□ 1.05
Ddx41Q91VN6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.58■■□□□ 1.05
Ddx41Q91VN6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx41Q91VN6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx41Q91VN6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ddx41Q91VN6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Ddx41Q91VN6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx41Q91VN6 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.56■■□□□ 1.04
Ddx41Q91VN6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.56■■□□□ 1.04
Ddx41Q91VN6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ddx41Q91VN6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx41Q91VN6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ddx41Q91VN6 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.56■■□□□ 1.04
Ddx41Q91VN6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx41Q91VN6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx41Q91VN6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.56■■□□□ 1.04
Ddx41Q91VN6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx41Q91VN6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ddx41Q91VN6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Ddx41Q91VN6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.55■■□□□ 1.04
Ddx41Q91VN6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx41Q91VN6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx41Q91VN6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx41Q91VN6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx41Q91VN6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Gm27011-201ENSMUST00000182352 972 ntBASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx41Q91VN6 Rarb-207ENSMUST00000225921 2756 ntBASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx41Q91VN6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms