Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
Rtl1Q7M732 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC33.96■■■■□ 3.03
Rtl1Q7M732 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC33.96■■■■□ 3.03
Rtl1Q7M732 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Rtl1Q7M732 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Rtl1Q7M732 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Rtl1Q7M732 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC33.96■■■■□ 3.03
Rtl1Q7M732 Gm12527-201ENSMUST00000117967 564 ntBASIC33.96■■■■□ 3.03
Rtl1Q7M732 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC33.96■■■■□ 3.03
Rtl1Q7M732 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC33.95■■■■□ 3.03
Rtl1Q7M732 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Rtl1Q7M732 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Rtl1Q7M732 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC33.95■■■■□ 3.02
Rtl1Q7M732 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC33.94■■■■□ 3.02
Rtl1Q7M732 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC33.94■■■■□ 3.02
Rtl1Q7M732 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
Rtl1Q7M732 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
Rtl1Q7M732 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC33.94■■■■□ 3.02
Rtl1Q7M732 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC33.94■■■■□ 3.02
Rtl1Q7M732 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC33.94■■■■□ 3.02
Rtl1Q7M732 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC33.94■■■■□ 3.02
Rtl1Q7M732 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Rtl1Q7M732 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC33.93■■■■□ 3.02
Rtl1Q7M732 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Rtl1Q7M732 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Rtl1Q7M732 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Rtl1Q7M732 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC33.92■■■■□ 3.02
Rtl1Q7M732 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Rtl1Q7M732 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Rtl1Q7M732 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Rtl1Q7M732 Gm13509-201ENSMUST00000119733 1308 ntBASIC33.92■■■■□ 3.02
Rtl1Q7M732 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC33.92■■■■□ 3.02
Rtl1Q7M732 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC33.92■■■■□ 3.02
Rtl1Q7M732 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC33.92■■■■□ 3.02
Rtl1Q7M732 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC33.91■■■■□ 3.02
Rtl1Q7M732 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC33.91■■■■□ 3.02
Rtl1Q7M732 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
Rtl1Q7M732 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Rtl1Q7M732 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Rtl1Q7M732 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Rtl1Q7M732 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
Rtl1Q7M732 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC33.9■■■■□ 3.02
Rtl1Q7M732 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC33.9■■■■□ 3.02
Rtl1Q7M732 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Rtl1Q7M732 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Rtl1Q7M732 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC33.9■■■■□ 3.02
Rtl1Q7M732 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Rtl1Q7M732 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC33.89■■■■□ 3.02
Rtl1Q7M732 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC33.89■■■■□ 3.02
Rtl1Q7M732 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC33.89■■■■□ 3.02
Rtl1Q7M732 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC33.89■■■■□ 3.02
Rtl1Q7M732 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Rtl1Q7M732 Gm10167-201ENSMUST00000150411 1479 ntBASIC33.88■■■■□ 3.01
Rtl1Q7M732 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC33.88■■■■□ 3.01
Rtl1Q7M732 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC33.88■■■■□ 3.01
Rtl1Q7M732 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Rtl1Q7M732 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Rtl1Q7M732 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Rtl1Q7M732 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC33.87■■■■□ 3.01
Rtl1Q7M732 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
Rtl1Q7M732 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC33.87■■■■□ 3.01
Rtl1Q7M732 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
Rtl1Q7M732 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Rtl1Q7M732 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
Rtl1Q7M732 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC33.87■■■■□ 3.01
Rtl1Q7M732 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
Rtl1Q7M732 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
Rtl1Q7M732 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC33.87■■■■□ 3.01
Rtl1Q7M732 Gm20049-201ENSMUST00000219950 730 ntBASIC33.87■■■■□ 3.01
Rtl1Q7M732 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Rtl1Q7M732 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC33.85■■■■□ 3.01
Rtl1Q7M732 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC33.85■■■■□ 3.01
Rtl1Q7M732 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Rtl1Q7M732 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Rtl1Q7M732 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Rtl1Q7M732 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC33.84■■■■□ 3.01
Rtl1Q7M732 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC33.84■■■■□ 3.01
Rtl1Q7M732 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Rtl1Q7M732 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC33.84■■■■□ 3.01
Rtl1Q7M732 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Rtl1Q7M732 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC33.84■■■■□ 3.01
Rtl1Q7M732 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC33.84■■■■□ 3.01
Rtl1Q7M732 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
Rtl1Q7M732 Gm37856-201ENSMUST00000191634 999 ntBASIC33.84■■■■□ 3.01
Rtl1Q7M732 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC33.84■■■■□ 3.01
Rtl1Q7M732 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC33.84■■■■□ 3.01
Rtl1Q7M732 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC33.84■■■■□ 3.01
Rtl1Q7M732 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC33.84■■■■□ 3.01
Rtl1Q7M732 Gm43672-201ENSMUST00000199072 1731 ntBASIC33.83■■■■□ 3.01
Rtl1Q7M732 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Rtl1Q7M732 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Rtl1Q7M732 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC33.83■■■■□ 3.01
Rtl1Q7M732 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
Rtl1Q7M732 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
Rtl1Q7M732 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC33.82■■■■□ 3
Rtl1Q7M732 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Rtl1Q7M732 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Rtl1Q7M732 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC33.82■■■■□ 3
Rtl1Q7M732 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC33.82■■■■□ 3
Rtl1Q7M732 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC33.82■■■■□ 3
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms