Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smchd1Q6P5D8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smchd1Q6P5D8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smchd1Q6P5D8 Gm20049-201ENSMUST00000219950 730 ntBASIC20.9■□□□□ 0.94
Smchd1Q6P5D8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smchd1Q6P5D8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smchd1Q6P5D8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smchd1Q6P5D8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smchd1Q6P5D8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smchd1Q6P5D8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smchd1Q6P5D8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smchd1Q6P5D8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smchd1Q6P5D8 Gm37856-201ENSMUST00000191634 999 ntBASIC20.89■□□□□ 0.93
Smchd1Q6P5D8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smchd1Q6P5D8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.89■□□□□ 0.93
Smchd1Q6P5D8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smchd1Q6P5D8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smchd1Q6P5D8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smchd1Q6P5D8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smchd1Q6P5D8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smchd1Q6P5D8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smchd1Q6P5D8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smchd1Q6P5D8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Smchd1Q6P5D8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smchd1Q6P5D8 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.85■□□□□ 0.93
Smchd1Q6P5D8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.85■□□□□ 0.93
Smchd1Q6P5D8 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.85■□□□□ 0.93
Smchd1Q6P5D8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smchd1Q6P5D8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smchd1Q6P5D8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smchd1Q6P5D8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smchd1Q6P5D8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smchd1Q6P5D8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smchd1Q6P5D8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.84■□□□□ 0.93
Smchd1Q6P5D8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smchd1Q6P5D8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smchd1Q6P5D8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Smchd1Q6P5D8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smchd1Q6P5D8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smchd1Q6P5D8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.84■□□□□ 0.93
Smchd1Q6P5D8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smchd1Q6P5D8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smchd1Q6P5D8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smchd1Q6P5D8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smchd1Q6P5D8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smchd1Q6P5D8 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.83■□□□□ 0.92
Smchd1Q6P5D8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smchd1Q6P5D8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Smchd1Q6P5D8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Smchd1Q6P5D8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smchd1Q6P5D8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.83■□□□□ 0.92
Smchd1Q6P5D8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smchd1Q6P5D8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.82■□□□□ 0.92
Smchd1Q6P5D8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.82■□□□□ 0.92
Smchd1Q6P5D8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smchd1Q6P5D8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smchd1Q6P5D8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smchd1Q6P5D8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smchd1Q6P5D8 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.82■□□□□ 0.92
Smchd1Q6P5D8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.82■□□□□ 0.92
Smchd1Q6P5D8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.82■□□□□ 0.92
Smchd1Q6P5D8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Smchd1Q6P5D8 Rab3c-203ENSMUST00000224180 967 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms