Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20■□□□□ 0.79
Trim43aQ3TL54 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim43aQ3TL54 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Trim43aQ3TL54 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43aQ3TL54 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43aQ3TL54 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim43aQ3TL54 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.99■□□□□ 0.79
Trim43aQ3TL54 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43aQ3TL54 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43aQ3TL54 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.99■□□□□ 0.79
Trim43aQ3TL54 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43aQ3TL54 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43aQ3TL54 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trim43aQ3TL54 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43aQ3TL54 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
Trim43aQ3TL54 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43aQ3TL54 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.98■□□□□ 0.79
Trim43aQ3TL54 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43aQ3TL54 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43aQ3TL54 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim43aQ3TL54 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43aQ3TL54 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43aQ3TL54 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43aQ3TL54 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43aQ3TL54 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.97■□□□□ 0.79
Trim43aQ3TL54 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43aQ3TL54 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43aQ3TL54 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43aQ3TL54 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43aQ3TL54 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43aQ3TL54 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43aQ3TL54 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43aQ3TL54 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43aQ3TL54 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim43aQ3TL54 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms