Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc9a3r1P70441 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r1P70441 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r1P70441 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.05■□□□□ 0.48
Slc9a3r1P70441 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r1P70441 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r1P70441 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc9a3r1P70441 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.05■□□□□ 0.48
Slc9a3r1P70441 Gm13148-201ENSMUST00000118892 745 ntBASIC18.05■□□□□ 0.48
Slc9a3r1P70441 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.05■□□□□ 0.48
Slc9a3r1P70441 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Slc9a3r1P70441 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Gm7290-201ENSMUST00000104990 617 ntBASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Gm12918-201ENSMUST00000120234 636 ntBASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Gm12441-201ENSMUST00000121806 588 ntBASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Gm15710-201ENSMUST00000121821 636 ntBASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Gm5075-201ENSMUST00000196916 622 ntBASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r1P70441 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc9a3r1P70441 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc9a3r1P70441 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc9a3r1P70441 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc9a3r1P70441 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc9a3r1P70441 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Slc9a3r1P70441 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a3r1P70441 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc9a3r1P70441 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a3r1P70441 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Slc9a3r1P70441 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Slc9a3r1P70441 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a3r1P70441 Gm4968-201ENSMUST00000071458 858 ntBASIC18.01■□□□□ 0.47
Slc9a3r1P70441 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Slc9a3r1P70441 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc9a3r1P70441 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a3r1P70441 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a3r1P70441 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc9a3r1P70441 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a3r1P70441 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Slc9a3r1P70441 Gm5408-201ENSMUST00000197998 747 ntBASIC18■□□□□ 0.47
Slc9a3r1P70441 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a3r1P70441 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a3r1P70441 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a3r1P70441 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc9a3r1P70441 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Slc9a3r1P70441 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc9a3r1P70441 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc9a3r1P70441 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc9a3r1P70441 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms