Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm7370-201ENSMUST00000219471 767 ntBASIC10.82□□□□□ -0.68
Herc1E9PZP8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc1E9PZP8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.82□□□□□ -0.68
Herc1E9PZP8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc1E9PZP8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Herc1E9PZP8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Herc1E9PZP8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc1E9PZP8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Herc1E9PZP8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Herc1E9PZP8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc1E9PZP8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Herc1E9PZP8 Gm43575-201ENSMUST00000196420 516 ntBASIC10.8□□□□□ -0.68
Herc1E9PZP8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc1E9PZP8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Herc1E9PZP8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc1E9PZP8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc1E9PZP8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc1E9PZP8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc1E9PZP8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC10.8□□□□□ -0.68
Herc1E9PZP8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc1E9PZP8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Herc1E9PZP8 Gm38285-201ENSMUST00000192928 922 ntBASIC10.8□□□□□ -0.68
Herc1E9PZP8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc1E9PZP8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.8□□□□□ -0.68
Herc1E9PZP8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.79□□□□□ -0.68
Herc1E9PZP8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Gm42911-201ENSMUST00000199360 1630 ntBASIC10.79□□□□□ -0.68
Herc1E9PZP8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.79□□□□□ -0.68
Herc1E9PZP8 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.79□□□□□ -0.68
Herc1E9PZP8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc1E9PZP8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Gm12382-201ENSMUST00000122005 922 ntBASIC10.78□□□□□ -0.68
Herc1E9PZP8 Gm43353-201ENSMUST00000199224 1295 ntBASIC10.78□□□□□ -0.68
Herc1E9PZP8 Gm5864-201ENSMUST00000202263 970 ntBASIC10.78□□□□□ -0.68
Herc1E9PZP8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc1E9PZP8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Herc1E9PZP8 Birc2-201ENSMUST00000054878 378 ntBASIC10.77□□□□□ -0.68
Herc1E9PZP8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Herc1E9PZP8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Herc1E9PZP8 Gm27459-201ENSMUST00000184860 107 ntBASIC10.77□□□□□ -0.69
Herc1E9PZP8 Gm5587-201ENSMUST00000206270 674 ntBASIC10.77□□□□□ -0.69
Herc1E9PZP8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Herc1E9PZP8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Herc1E9PZP8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Herc1E9PZP8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Herc1E9PZP8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.77□□□□□ -0.69
Herc1E9PZP8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Herc1E9PZP8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms