Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Notumos-201ENSMUST00000151998 2659 ntBASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm7860-201ENSMUST00000121190 879 ntBASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv30A0A0B4J1P1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv30A0A0B4J1P1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trbv30A0A0B4J1P1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Gm18284-201ENSMUST00000172604 624 ntBASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv30A0A0B4J1P1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbv30A0A0B4J1P1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms