Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.69■■□□□ 1.06
Ddx41Q91VN6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx41Q91VN6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx41Q91VN6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx41Q91VN6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx41Q91VN6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx41Q91VN6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Ddx41Q91VN6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx41Q91VN6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx41Q91VN6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx41Q91VN6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.68■■□□□ 1.06
Ddx41Q91VN6 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.68■■□□□ 1.06
Ddx41Q91VN6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx41Q91VN6 AA386476-201ENSMUST00000098781 1665 ntBASIC21.68■■□□□ 1.06
Ddx41Q91VN6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ddx41Q91VN6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Ddx41Q91VN6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx41Q91VN6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx41Q91VN6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
Ddx41Q91VN6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ddx41Q91VN6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx41Q91VN6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx41Q91VN6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx41Q91VN6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx41Q91VN6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ddx41Q91VN6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Ddx41Q91VN6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx41Q91VN6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx41Q91VN6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx41Q91VN6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx41Q91VN6 Gm12933-201ENSMUST00000120203 872 ntBASIC21.66■■□□□ 1.06
Ddx41Q91VN6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.66■■□□□ 1.06
Ddx41Q91VN6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.66■■□□□ 1.06
Ddx41Q91VN6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ddx41Q91VN6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.66■■□□□ 1.06
Ddx41Q91VN6 Gm10602-201ENSMUST00000098239 609 ntBASIC21.66■■□□□ 1.06
Ddx41Q91VN6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.66■■□□□ 1.06
Ddx41Q91VN6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx41Q91VN6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx41Q91VN6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx41Q91VN6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx41Q91VN6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx41Q91VN6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx41Q91VN6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx41Q91VN6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx41Q91VN6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ddx41Q91VN6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx41Q91VN6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Gm13146-201ENSMUST00000118508 780 ntBASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx41Q91VN6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx41Q91VN6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms