Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrif1Q8CDD9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrif1Q8CDD9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lrif1Q8CDD9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrif1Q8CDD9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrif1Q8CDD9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.72■□□□□ 0.59
Lrif1Q8CDD9 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.71■□□□□ 0.59
Lrif1Q8CDD9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lrif1Q8CDD9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Lrif1Q8CDD9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrif1Q8CDD9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrif1Q8CDD9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrif1Q8CDD9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.71■□□□□ 0.58
Lrif1Q8CDD9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Lrif1Q8CDD9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.7■□□□□ 0.58
Lrif1Q8CDD9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrif1Q8CDD9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrif1Q8CDD9 Gm27454-201ENSMUST00000185090 204 ntBASIC18.7■□□□□ 0.58
Lrif1Q8CDD9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrif1Q8CDD9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrif1Q8CDD9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrif1Q8CDD9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrif1Q8CDD9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrif1Q8CDD9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrif1Q8CDD9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Lrif1Q8CDD9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms