Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Spcs1-204ENSMUST00000226782 949 ntBASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Smim4Q8C1Q6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Golph3-205ENSMUST00000228671 2842 ntBASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smim4Q8C1Q6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Gm43137-201ENSMUST00000198052 594 ntBASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smim4Q8C1Q6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smim4Q8C1Q6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smim4Q8C1Q6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Smim4Q8C1Q6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Smim4Q8C1Q6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Smim4Q8C1Q6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Smim4Q8C1Q6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smim4Q8C1Q6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim4Q8C1Q6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Smim4Q8C1Q6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smim4Q8C1Q6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim4Q8C1Q6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smim4Q8C1Q6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim4Q8C1Q6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smim4Q8C1Q6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smim4Q8C1Q6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smim4Q8C1Q6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim4Q8C1Q6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smim4Q8C1Q6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.81■□□□□ 0.12
Smim4Q8C1Q6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.81■□□□□ 0.12
Smim4Q8C1Q6 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.81■□□□□ 0.12
Smim4Q8C1Q6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms