Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nop53Q8BK35 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nop53Q8BK35 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nop53Q8BK35 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.27■□□□□ 0.84
Nop53Q8BK35 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nop53Q8BK35 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.27■□□□□ 0.83
Nop53Q8BK35 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop53Q8BK35 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop53Q8BK35 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
Nop53Q8BK35 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop53Q8BK35 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.26■□□□□ 0.83
Nop53Q8BK35 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop53Q8BK35 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.26■□□□□ 0.83
Nop53Q8BK35 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop53Q8BK35 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop53Q8BK35 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop53Q8BK35 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.26■□□□□ 0.83
Nop53Q8BK35 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nop53Q8BK35 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Nop53Q8BK35 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nop53Q8BK35 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nop53Q8BK35 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nop53Q8BK35 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.25■□□□□ 0.83
Nop53Q8BK35 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nop53Q8BK35 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Nop53Q8BK35 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nop53Q8BK35 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Nop53Q8BK35 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Nop53Q8BK35 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nop53Q8BK35 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.25■□□□□ 0.83
Nop53Q8BK35 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop53Q8BK35 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.24■□□□□ 0.83
Nop53Q8BK35 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nop53Q8BK35 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nop53Q8BK35 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nop53Q8BK35 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nop53Q8BK35 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nop53Q8BK35 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Nop53Q8BK35 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.23■□□□□ 0.83
Nop53Q8BK35 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nop53Q8BK35 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nop53Q8BK35 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nop53Q8BK35 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nop53Q8BK35 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.22■□□□□ 0.83
Nop53Q8BK35 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.22■□□□□ 0.83
Nop53Q8BK35 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nop53Q8BK35 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nop53Q8BK35 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nop53Q8BK35 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.21■□□□□ 0.83
Nop53Q8BK35 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nop53Q8BK35 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nop53Q8BK35 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.21■□□□□ 0.83
Nop53Q8BK35 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nop53Q8BK35 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nop53Q8BK35 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nop53Q8BK35 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Nop53Q8BK35 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nop53Q8BK35 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nop53Q8BK35 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.2■□□□□ 0.82
Nop53Q8BK35 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nop53Q8BK35 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.2■□□□□ 0.82
Nop53Q8BK35 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.2■□□□□ 0.82
Nop53Q8BK35 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nop53Q8BK35 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nop53Q8BK35 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms