Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp6nlQ80XC3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp6nlQ80XC3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp6nlQ80XC3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp6nlQ80XC3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Usp6nlQ80XC3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp6nlQ80XC3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.97■□□□□ 0.95
Usp6nlQ80XC3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp6nlQ80XC3 Dio3-201ENSMUST00000097228 1449 ntBASIC20.97■□□□□ 0.95
Usp6nlQ80XC3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp6nlQ80XC3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.97■□□□□ 0.95
Usp6nlQ80XC3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp6nlQ80XC3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp6nlQ80XC3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Usp6nlQ80XC3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Mir6982-201ENSMUST00000184354 68 ntBASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Gm2559-201ENSMUST00000201323 363 ntBASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Usp6nlQ80XC3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Usp6nlQ80XC3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Usp6nlQ80XC3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp6nlQ80XC3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp6nlQ80XC3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.93■□□□□ 0.94
Usp6nlQ80XC3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp6nlQ80XC3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp6nlQ80XC3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Usp6nlQ80XC3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.93■□□□□ 0.94
Usp6nlQ80XC3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Usp6nlQ80XC3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Usp6nlQ80XC3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Usp6nlQ80XC3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Usp6nlQ80XC3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms