Protein–RNA interactions for Protein: Q6AW69

Cgnl1, Cingulin-like protein 1, mousemouse

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgnl1Q6AW69 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cgnl1Q6AW69 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Gm43017-201ENSMUST00000198296 752 ntBASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Gm40848-201ENSMUST00000221998 324 ntBASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cgnl1Q6AW69 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cgnl1Q6AW69 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cgnl1Q6AW69 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Rncr4-201ENSMUST00000194541 2234 ntBASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cgnl1Q6AW69 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cgnl1Q6AW69 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cgnl1Q6AW69 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cgnl1Q6AW69 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cgnl1Q6AW69 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cgnl1Q6AW69 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cgnl1Q6AW69 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cgnl1Q6AW69 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cgnl1Q6AW69 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cgnl1Q6AW69 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cgnl1Q6AW69 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Gm9885-202ENSMUST00000186234 2209 ntBASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cgnl1Q6AW69 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cgnl1Q6AW69 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Cgnl1Q6AW69 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cgnl1Q6AW69 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cgnl1Q6AW69 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cgnl1Q6AW69 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Cgnl1Q6AW69 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cgnl1Q6AW69 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms