Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Clns1aQ61189 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clns1aQ61189 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clns1aQ61189 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clns1aQ61189 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clns1aQ61189 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.22■□□□□ 0.19
Clns1aQ61189 Gm43530-201ENSMUST00000195920 274 ntBASIC16.22■□□□□ 0.19
Clns1aQ61189 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clns1aQ61189 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clns1aQ61189 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clns1aQ61189 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clns1aQ61189 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clns1aQ61189 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clns1aQ61189 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clns1aQ61189 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clns1aQ61189 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.21■□□□□ 0.19
Clns1aQ61189 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clns1aQ61189 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clns1aQ61189 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.21■□□□□ 0.19
Clns1aQ61189 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clns1aQ61189 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Clns1aQ61189 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clns1aQ61189 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Clns1aQ61189 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.21■□□□□ 0.19
Clns1aQ61189 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clns1aQ61189 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clns1aQ61189 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clns1aQ61189 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clns1aQ61189 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Clns1aQ61189 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Clns1aQ61189 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clns1aQ61189 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Clns1aQ61189 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Clns1aQ61189 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Clns1aQ61189 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.2■□□□□ 0.18
Clns1aQ61189 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clns1aQ61189 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clns1aQ61189 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clns1aQ61189 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clns1aQ61189 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.19■□□□□ 0.18
Clns1aQ61189 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clns1aQ61189 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clns1aQ61189 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clns1aQ61189 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.19■□□□□ 0.18
Clns1aQ61189 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.19■□□□□ 0.18
Clns1aQ61189 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clns1aQ61189 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clns1aQ61189 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clns1aQ61189 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clns1aQ61189 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Clns1aQ61189 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clns1aQ61189 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.18■□□□□ 0.18
Clns1aQ61189 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clns1aQ61189 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.18■□□□□ 0.18
Clns1aQ61189 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.18■□□□□ 0.18
Clns1aQ61189 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Clns1aQ61189 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clns1aQ61189 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clns1aQ61189 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
Clns1aQ61189 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.17■□□□□ 0.18
Clns1aQ61189 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.17■□□□□ 0.18
Clns1aQ61189 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.17■□□□□ 0.18
Clns1aQ61189 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.17■□□□□ 0.18
Clns1aQ61189 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clns1aQ61189 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms