Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Gm9397-201ENSMUST00000200125 605 ntBASIC15.75■□□□□ 0.11
Trim63Q38HM4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim63Q38HM4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim63Q38HM4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.74■□□□□ 0.11
Trim63Q38HM4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim63Q38HM4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.73■□□□□ 0.11
Trim63Q38HM4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim63Q38HM4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.72■□□□□ 0.11
Trim63Q38HM4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.72■□□□□ 0.11
Trim63Q38HM4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.72■□□□□ 0.11
Trim63Q38HM4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim63Q38HM4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim63Q38HM4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim63Q38HM4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim63Q38HM4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim63Q38HM4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim63Q38HM4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim63Q38HM4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim63Q38HM4 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.71■□□□□ 0.11
Trim63Q38HM4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim63Q38HM4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim63Q38HM4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim63Q38HM4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim63Q38HM4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim63Q38HM4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.71■□□□□ 0.1
Trim63Q38HM4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim63Q38HM4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim63Q38HM4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.7■□□□□ 0.1
Trim63Q38HM4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim63Q38HM4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim63Q38HM4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 122.3 ms