Protein–RNA interactions for Protein: J3QQ59

Gm3383, Predicted gene 3194, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3383J3QQ59 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3383J3QQ59 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3383J3QQ59 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3383J3QQ59 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gm3383J3QQ59 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3383J3QQ59 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3383J3QQ59 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3383J3QQ59 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Gm22325-201ENSMUST00000158904 308 ntBASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Gm6576-201ENSMUST00000169678 883 ntBASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3383J3QQ59 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.52■□□□□ 0.88
Gm3383J3QQ59 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.52■□□□□ 0.88
Gm3383J3QQ59 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm3383J3QQ59 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm3383J3QQ59 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm3383J3QQ59 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm3383J3QQ59 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm3383J3QQ59 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.51■□□□□ 0.87
Gm3383J3QQ59 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3383J3QQ59 Gm44549-201ENSMUST00000208351 577 ntBASIC20.51■□□□□ 0.87
Gm3383J3QQ59 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3383J3QQ59 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3383J3QQ59 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3383J3QQ59 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3383J3QQ59 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3383J3QQ59 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3383J3QQ59 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3383J3QQ59 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.5■□□□□ 0.87
Gm3383J3QQ59 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.5■□□□□ 0.87
Gm3383J3QQ59 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.5■□□□□ 0.87
Gm3383J3QQ59 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3383J3QQ59 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3383J3QQ59 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3383J3QQ59 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Gm18666-201ENSMUST00000190039 958 ntBASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3383J3QQ59 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3383J3QQ59 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3383J3QQ59 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3383J3QQ59 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.48■□□□□ 0.87
Gm3383J3QQ59 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.48■□□□□ 0.87
Gm3383J3QQ59 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3383J3QQ59 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3383J3QQ59 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.48■□□□□ 0.87
Gm3383J3QQ59 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
Gm3383J3QQ59 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3383J3QQ59 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Gm3383J3QQ59 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3383J3QQ59 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3383J3QQ59 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3383J3QQ59 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3383J3QQ59 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3383J3QQ59 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Gm3383J3QQ59 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.47■□□□□ 0.87
Gm3383J3QQ59 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3383J3QQ59 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms