Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vma21-psA0A140T8R2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vma21-psA0A140T8R2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vma21-psA0A140T8R2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Golph3-205ENSMUST00000228671 2842 ntBASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vma21-psA0A140T8R2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vma21-psA0A140T8R2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 Spcs1-204ENSMUST00000226782 949 ntBASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vma21-psA0A140T8R2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms