Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv30A0A0B4J1P1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Gm10493-201ENSMUST00000097270 612 ntBASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv30A0A0B4J1P1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv30A0A0B4J1P1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv30A0A0B4J1P1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv30A0A0B4J1P1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trbv30A0A0B4J1P1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv30A0A0B4J1P1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv30A0A0B4J1P1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv30A0A0B4J1P1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv30A0A0B4J1P1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv30A0A0B4J1P1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trbv30A0A0B4J1P1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm42778-201ENSMUST00000199644 553 ntBASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trbv30A0A0B4J1P1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv30A0A0B4J1P1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Gm5874-201ENSMUST00000096101 508 ntBASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv30A0A0B4J1P1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv30A0A0B4J1P1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 227.4 ms