Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav17A0A075B655 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav17A0A075B655 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
Trav17A0A075B655 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav17A0A075B655 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav17A0A075B655 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav17A0A075B655 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav17A0A075B655 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav17A0A075B655 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav17A0A075B655 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.08■□□□□ 0
Trav17A0A075B655 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav17A0A075B655 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav17A0A075B655 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav17A0A075B655 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
Trav17A0A075B655 Gm7417-201ENSMUST00000192950 473 ntBASIC15.08■□□□□ 0
Trav17A0A075B655 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav17A0A075B655 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav17A0A075B655 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav17A0A075B655 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav17A0A075B655 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav17A0A075B655 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav17A0A075B655 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav17A0A075B655 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.07■□□□□ 0
Trav17A0A075B655 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav17A0A075B655 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav17A0A075B655 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav17A0A075B655 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav17A0A075B655 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.07■□□□□ 0
Trav17A0A075B655 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav17A0A075B655 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.06■□□□□ 0
Trav17A0A075B655 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav17A0A075B655 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav17A0A075B655 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.06■□□□□ 0
Trav17A0A075B655 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.06■□□□□ 0
Trav17A0A075B655 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav17A0A075B655 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.06■□□□□ 0
Trav17A0A075B655 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.06■□□□□ 0
Trav17A0A075B655 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav17A0A075B655 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav17A0A075B655 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.05■□□□□ 0
Trav17A0A075B655 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav17A0A075B655 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav17A0A075B655 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav17A0A075B655 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav17A0A075B655 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.05■□□□□ -0
Trav17A0A075B655 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.05■□□□□ -0
Trav17A0A075B655 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav17A0A075B655 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav17A0A075B655 Gm15820-201ENSMUST00000201566 728 ntBASIC15.05■□□□□ -0
Trav17A0A075B655 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.05■□□□□ -0
Trav17A0A075B655 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav17A0A075B655 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.04■□□□□ -0
Trav17A0A075B655 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.04■□□□□ -0
Trav17A0A075B655 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.04■□□□□ -0
Trav17A0A075B655 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.04■□□□□ -0
Trav17A0A075B655 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.04■□□□□ -0
Trav17A0A075B655 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav17A0A075B655 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.03■□□□□ -0
Trav17A0A075B655 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Trav17A0A075B655 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav17A0A075B655 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms