Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
Ccdc96Q9CR92 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc96Q9CR92 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc96Q9CR92 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc96Q9CR92 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc96Q9CR92 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc96Q9CR92 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc96Q9CR92 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc96Q9CR92 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.62■■□□□ 1.05
Ccdc96Q9CR92 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc96Q9CR92 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc96Q9CR92 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc96Q9CR92 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc96Q9CR92 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc96Q9CR92 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc96Q9CR92 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc96Q9CR92 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc96Q9CR92 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc96Q9CR92 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc96Q9CR92 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc96Q9CR92 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc96Q9CR92 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc96Q9CR92 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc96Q9CR92 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ccdc96Q9CR92 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
Ccdc96Q9CR92 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc96Q9CR92 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc96Q9CR92 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.6■■□□□ 1.05
Ccdc96Q9CR92 AV356131-201ENSMUST00000206201 750 ntBASIC21.6■■□□□ 1.05
Ccdc96Q9CR92 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc96Q9CR92 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc96Q9CR92 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.6■■□□□ 1.05
Ccdc96Q9CR92 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc96Q9CR92 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc96Q9CR92 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc96Q9CR92 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc96Q9CR92 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc96Q9CR92 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Ccdc96Q9CR92 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.59■■□□□ 1.05
Ccdc96Q9CR92 Gm37179-201ENSMUST00000194862 823 ntBASIC21.59■■□□□ 1.05
Ccdc96Q9CR92 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc96Q9CR92 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc96Q9CR92 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc96Q9CR92 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ccdc96Q9CR92 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.58■■□□□ 1.05
Ccdc96Q9CR92 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc96Q9CR92 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.58■■□□□ 1.04
Ccdc96Q9CR92 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Gm10033-202ENSMUST00000211874 928 ntBASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc96Q9CR92 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.56■■□□□ 1.04
Ccdc96Q9CR92 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
Ccdc96Q9CR92 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms