Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.81■□□□□ 0.6
Lrif1Q8CDD9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lrif1Q8CDD9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrif1Q8CDD9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrif1Q8CDD9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrif1Q8CDD9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrif1Q8CDD9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrif1Q8CDD9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.79■□□□□ 0.6
Lrif1Q8CDD9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.79■□□□□ 0.6
Lrif1Q8CDD9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrif1Q8CDD9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lrif1Q8CDD9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lrif1Q8CDD9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lrif1Q8CDD9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrif1Q8CDD9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrif1Q8CDD9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrif1Q8CDD9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.77■□□□□ 0.6
Lrif1Q8CDD9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lrif1Q8CDD9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Lrif1Q8CDD9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.77■□□□□ 0.6
Lrif1Q8CDD9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lrif1Q8CDD9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lrif1Q8CDD9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrif1Q8CDD9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lrif1Q8CDD9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrif1Q8CDD9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms