Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp6nlQ80XC3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp6nlQ80XC3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Usp6nlQ80XC3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp6nlQ80XC3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Usp6nlQ80XC3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp6nlQ80XC3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp6nlQ80XC3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp6nlQ80XC3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp6nlQ80XC3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp6nlQ80XC3 Gm27275-201ENSMUST00000184318 272 ntBASIC21.09■□□□□ 0.97
Usp6nlQ80XC3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp6nlQ80XC3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.09■□□□□ 0.97
Usp6nlQ80XC3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Usp6nlQ80XC3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp6nlQ80XC3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp6nlQ80XC3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp6nlQ80XC3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Usp6nlQ80XC3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Usp6nlQ80XC3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Usp6nlQ80XC3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.08■□□□□ 0.97
Usp6nlQ80XC3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Usp6nlQ80XC3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp6nlQ80XC3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp6nlQ80XC3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp6nlQ80XC3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp6nlQ80XC3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp6nlQ80XC3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp6nlQ80XC3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp6nlQ80XC3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.06■□□□□ 0.96
Usp6nlQ80XC3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp6nlQ80XC3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Usp6nlQ80XC3 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.06■□□□□ 0.96
Usp6nlQ80XC3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Gm12896-201ENSMUST00000118430 226 ntBASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp6nlQ80XC3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp6nlQ80XC3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp6nlQ80XC3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp6nlQ80XC3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp6nlQ80XC3 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.03■□□□□ 0.96
Usp6nlQ80XC3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp6nlQ80XC3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp6nlQ80XC3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp6nlQ80XC3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Usp6nlQ80XC3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp6nlQ80XC3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp6nlQ80XC3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp6nlQ80XC3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.02■□□□□ 0.96
Usp6nlQ80XC3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.02■□□□□ 0.96
Usp6nlQ80XC3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp6nlQ80XC3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp6nlQ80XC3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp6nlQ80XC3 Gm5643-201ENSMUST00000117081 966 ntBASIC21■□□□□ 0.95
Usp6nlQ80XC3 Mir7071-201ENSMUST00000184847 69 ntBASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms