Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp25Q3U435 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp25Q3U435 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Mmp25Q3U435 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.93■□□□□ 0.46
Mmp25Q3U435 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp25Q3U435 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp25Q3U435 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp25Q3U435 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp25Q3U435 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.92■□□□□ 0.46
Mmp25Q3U435 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp25Q3U435 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Mmp25Q3U435 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp25Q3U435 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Mmp25Q3U435 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp25Q3U435 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Mmp25Q3U435 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp25Q3U435 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp25Q3U435 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Mmp25Q3U435 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp25Q3U435 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Mmp25Q3U435 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp25Q3U435 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp25Q3U435 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Mmp25Q3U435 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.91■□□□□ 0.46
Mmp25Q3U435 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp25Q3U435 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Mmp25Q3U435 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp25Q3U435 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp25Q3U435 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Mmp25Q3U435 Golph3-202ENSMUST00000226517 2359 ntBASIC17.9■□□□□ 0.46
Mmp25Q3U435 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp25Q3U435 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp25Q3U435 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Mmp25Q3U435 Gm27405-201ENSMUST00000184201 112 ntBASIC17.9■□□□□ 0.46
Mmp25Q3U435 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.9■□□□□ 0.46
Mmp25Q3U435 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.9■□□□□ 0.46
Mmp25Q3U435 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp25Q3U435 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp25Q3U435 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp25Q3U435 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.9■□□□□ 0.46
Mmp25Q3U435 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Mmp25Q3U435 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.89■□□□□ 0.46
Mmp25Q3U435 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Mmp25Q3U435 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp25Q3U435 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Gm13534-201ENSMUST00000121169 513 ntBASIC17.89■□□□□ 0.45
Mmp25Q3U435 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp25Q3U435 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp25Q3U435 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Mmp25Q3U435 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.88■□□□□ 0.45
Mmp25Q3U435 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Gm7514-201ENSMUST00000209475 934 ntBASIC17.88■□□□□ 0.45
Mmp25Q3U435 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.88■□□□□ 0.45
Mmp25Q3U435 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.88■□□□□ 0.45
Mmp25Q3U435 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp25Q3U435 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp25Q3U435 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp25Q3U435 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Mmp25Q3U435 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp25Q3U435 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp25Q3U435 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.87■□□□□ 0.45
Mmp25Q3U435 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.87■□□□□ 0.45
Mmp25Q3U435 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.87■□□□□ 0.45
Mmp25Q3U435 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp25Q3U435 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Mmp25Q3U435 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp25Q3U435 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp25Q3U435 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp25Q3U435 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp25Q3U435 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp25Q3U435 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp25Q3U435 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp25Q3U435 Gm7291-201ENSMUST00000199147 382 ntBASIC17.86■□□□□ 0.45
Mmp25Q3U435 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp25Q3U435 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.86■□□□□ 0.45
Mmp25Q3U435 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp25Q3U435 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms