Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxd8P23463 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hoxd8P23463 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Hoxd8P23463 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Trmt13-210ENSMUST00000198454 880 ntBASIC19.84■□□□□ 0.77
Hoxd8P23463 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.84■□□□□ 0.77
Hoxd8P23463 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.84■□□□□ 0.77
Hoxd8P23463 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxd8P23463 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxd8P23463 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxd8P23463 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Hoxd8P23463 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxd8P23463 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxd8P23463 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxd8P23463 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Hoxd8P23463 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxd8P23463 Gm10252-201ENSMUST00000209541 832 ntBASIC19.83■□□□□ 0.77
Hoxd8P23463 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxd8P23463 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxd8P23463 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxd8P23463 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxd8P23463 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.82■□□□□ 0.76
Hoxd8P23463 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxd8P23463 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxd8P23463 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.82■□□□□ 0.76
Hoxd8P23463 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxd8P23463 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxd8P23463 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxd8P23463 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hoxd8P23463 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxd8P23463 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.81■□□□□ 0.76
Hoxd8P23463 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxd8P23463 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.81■□□□□ 0.76
Hoxd8P23463 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.81■□□□□ 0.76
Hoxd8P23463 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxd8P23463 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxd8P23463 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.8■□□□□ 0.76
Hoxd8P23463 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.8■□□□□ 0.76
Hoxd8P23463 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxd8P23463 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxd8P23463 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.8■□□□□ 0.76
Hoxd8P23463 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxd8P23463 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxd8P23463 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hoxd8P23463 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Hoxd8P23463 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxd8P23463 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxd8P23463 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxd8P23463 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxd8P23463 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.79■□□□□ 0.76
Hoxd8P23463 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.79■□□□□ 0.76
Hoxd8P23463 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
Hoxd8P23463 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxd8P23463 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxd8P23463 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.78■□□□□ 0.76
Hoxd8P23463 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxd8P23463 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxd8P23463 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxd8P23463 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxd8P23463 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxd8P23463 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxd8P23463 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Hoxd8P23463 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxd8P23463 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxd8P23463 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.78■□□□□ 0.76
Hoxd8P23463 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Hoxd8P23463 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.77■□□□□ 0.76
Hoxd8P23463 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.77■□□□□ 0.76
Hoxd8P23463 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxd8P23463 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxd8P23463 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxd8P23463 Dio3-201ENSMUST00000097228 1449 ntBASIC19.76■□□□□ 0.75
Hoxd8P23463 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Hoxd8P23463 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Hoxd8P23463 Gm12896-201ENSMUST00000118430 226 ntBASIC19.76■□□□□ 0.75
Hoxd8P23463 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxd8P23463 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxd8P23463 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.76■□□□□ 0.75
Hoxd8P23463 Gm44549-201ENSMUST00000208351 577 ntBASIC19.76■□□□□ 0.75
Hoxd8P23463 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.76■□□□□ 0.75
Hoxd8P23463 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxd8P23463 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxd8P23463 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.76■□□□□ 0.75
Hoxd8P23463 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxd8P23463 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxd8P23463 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxd8P23463 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.76■□□□□ 0.75
Hoxd8P23463 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxd8P23463 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxd8P23463 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 123.6 ms