Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.07■□□□□ 0.64
Dnmt3aO88508 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dnmt3aO88508 Gm5874-201ENSMUST00000096101 508 ntBASIC19.07■□□□□ 0.64
Dnmt3aO88508 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Dnmt3aO88508 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dnmt3aO88508 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Dnmt3aO88508 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.07■□□□□ 0.64
Dnmt3aO88508 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Dnmt3aO88508 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Dnmt3aO88508 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dnmt3aO88508 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.06■□□□□ 0.64
Dnmt3aO88508 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dnmt3aO88508 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.06■□□□□ 0.64
Dnmt3aO88508 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dnmt3aO88508 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dnmt3aO88508 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Dnmt3aO88508 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dnmt3aO88508 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Dnmt3aO88508 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Dnmt3aO88508 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Dnmt3aO88508 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Dnmt3aO88508 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.05■□□□□ 0.64
Dnmt3aO88508 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.05■□□□□ 0.64
Dnmt3aO88508 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.05■□□□□ 0.64
Dnmt3aO88508 Gm9988-201ENSMUST00000069786 435 ntBASIC19.05■□□□□ 0.64
Dnmt3aO88508 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Dnmt3aO88508 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Dnmt3aO88508 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dnmt3aO88508 Gm8495-201ENSMUST00000188740 694 ntBASIC19.04■□□□□ 0.64
Dnmt3aO88508 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Dnmt3aO88508 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.04■□□□□ 0.64
Dnmt3aO88508 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dnmt3aO88508 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Dnmt3aO88508 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Dnmt3aO88508 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dnmt3aO88508 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Dnmt3aO88508 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.03■□□□□ 0.64
Dnmt3aO88508 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.03■□□□□ 0.64
Dnmt3aO88508 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.03■□□□□ 0.64
Dnmt3aO88508 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dnmt3aO88508 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dnmt3aO88508 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dnmt3aO88508 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.03■□□□□ 0.64
Dnmt3aO88508 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Dnmt3aO88508 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dnmt3aO88508 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Dnmt3aO88508 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Dnmt3aO88508 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dnmt3aO88508 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.02■□□□□ 0.64
Dnmt3aO88508 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dnmt3aO88508 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dnmt3aO88508 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Dnmt3aO88508 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dnmt3aO88508 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dnmt3aO88508 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Dnmt3aO88508 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.02■□□□□ 0.64
Dnmt3aO88508 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Dnmt3aO88508 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Dnmt3aO88508 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Dnmt3aO88508 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19■□□□□ 0.63
Dnmt3aO88508 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Dnmt3aO88508 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Dnmt3aO88508 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19■□□□□ 0.63
Dnmt3aO88508 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Dnmt3aO88508 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19■□□□□ 0.63
Dnmt3aO88508 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dnmt3aO88508 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dnmt3aO88508 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dnmt3aO88508 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Dnmt3aO88508 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
Dnmt3aO88508 Gm42778-201ENSMUST00000199644 553 ntBASIC18.99■□□□□ 0.63
Dnmt3aO88508 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms