Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Igkv5-39A0A0G2JDV4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gm27011-201ENSMUST00000182352 972 ntBASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gm12441-201ENSMUST00000121806 588 ntBASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv5-39A0A0G2JDV4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.09■□□□□ 0.65
Igkv5-39A0A0G2JDV4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.09■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.09■□□□□ 0.65
Igkv5-39A0A0G2JDV4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms