Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.6■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Golph3-202ENSMUST00000226517 2359 ntBASIC19.59■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.59■□□□□ 0.73
Igkv5-45A0A0B4J1J1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.59■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Gm6211-202ENSMUST00000167849 925 ntBASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.54■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-45A0A0B4J1J1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms