Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim33Q99PP7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.88■□□□□ 0.61
Trim33Q99PP7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim33Q99PP7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim33Q99PP7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim33Q99PP7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim33Q99PP7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim33Q99PP7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim33Q99PP7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim33Q99PP7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim33Q99PP7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim33Q99PP7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim33Q99PP7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim33Q99PP7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim33Q99PP7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim33Q99PP7 Gm15039-201ENSMUST00000118914 875 ntBASIC18.86■□□□□ 0.61
Trim33Q99PP7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
Trim33Q99PP7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim33Q99PP7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim33Q99PP7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim33Q99PP7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim33Q99PP7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim33Q99PP7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Trim33Q99PP7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim33Q99PP7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim33Q99PP7 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.85■□□□□ 0.61
Trim33Q99PP7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim33Q99PP7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Trim33Q99PP7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim33Q99PP7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim33Q99PP7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim33Q99PP7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim33Q99PP7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim33Q99PP7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim33Q99PP7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim33Q99PP7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim33Q99PP7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.85■□□□□ 0.61
Trim33Q99PP7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim33Q99PP7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim33Q99PP7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim33Q99PP7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim33Q99PP7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim33Q99PP7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim33Q99PP7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Trim33Q99PP7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.83■□□□□ 0.6
Trim33Q99PP7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim33Q99PP7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim33Q99PP7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Trim33Q99PP7 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.83■□□□□ 0.6
Trim33Q99PP7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim33Q99PP7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Trim33Q99PP7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim33Q99PP7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim33Q99PP7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim33Q99PP7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim33Q99PP7 Gm27801-201ENSMUST00000184174 223 ntBASIC18.82■□□□□ 0.6
Trim33Q99PP7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim33Q99PP7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim33Q99PP7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim33Q99PP7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim33Q99PP7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim33Q99PP7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim33Q99PP7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim33Q99PP7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim33Q99PP7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim33Q99PP7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim33Q99PP7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim33Q99PP7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim33Q99PP7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim33Q99PP7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim33Q99PP7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms