Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb2Q91Y00 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcdhb2Q91Y00 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb2Q91Y00 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
Pcdhb2Q91Y00 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb2Q91Y00 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhb2Q91Y00 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb2Q91Y00 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb2Q91Y00 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pcdhb2Q91Y00 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Pcdhb2Q91Y00 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb2Q91Y00 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb2Q91Y00 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Gm10033-202ENSMUST00000211874 928 ntBASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb2Q91Y00 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.27■□□□□ 0.83
Pcdhb2Q91Y00 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb2Q91Y00 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Pcdhb2Q91Y00 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb2Q91Y00 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 AV356131-201ENSMUST00000206201 750 ntBASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb2Q91Y00 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.25■□□□□ 0.83
Pcdhb2Q91Y00 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb2Q91Y00 Gm26571-201ENSMUST00000181399 666 ntBASIC20.25■□□□□ 0.83
Pcdhb2Q91Y00 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb2Q91Y00 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhb2Q91Y00 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhb2Q91Y00 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb2Q91Y00 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb2Q91Y00 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdhb2Q91Y00 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.24■□□□□ 0.83
Pcdhb2Q91Y00 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb2Q91Y00 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb2Q91Y00 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms