Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpap2Q8VC34 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpap2Q8VC34 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpap2Q8VC34 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpap2Q8VC34 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpap2Q8VC34 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.01■□□□□ 0.95
Rpap2Q8VC34 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpap2Q8VC34 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpap2Q8VC34 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rpap2Q8VC34 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpap2Q8VC34 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpap2Q8VC34 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpap2Q8VC34 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpap2Q8VC34 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rpap2Q8VC34 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21■□□□□ 0.95
Rpap2Q8VC34 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21■□□□□ 0.95
Rpap2Q8VC34 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rpap2Q8VC34 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpap2Q8VC34 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpap2Q8VC34 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpap2Q8VC34 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21■□□□□ 0.95
Rpap2Q8VC34 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpap2Q8VC34 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpap2Q8VC34 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rpap2Q8VC34 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.97■□□□□ 0.95
Rpap2Q8VC34 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rpap2Q8VC34 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.97■□□□□ 0.95
Rpap2Q8VC34 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpap2Q8VC34 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpap2Q8VC34 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpap2Q8VC34 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpap2Q8VC34 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpap2Q8VC34 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Gm9988-201ENSMUST00000069786 435 ntBASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rpap2Q8VC34 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms