Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11541Q8C4D8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11541Q8C4D8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11541Q8C4D8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11541Q8C4D8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11541Q8C4D8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11541Q8C4D8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Gm11541Q8C4D8 Rarb-207ENSMUST00000225921 2756 ntBASIC17.15■□□□□ 0.34
Gm11541Q8C4D8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm11541Q8C4D8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
Gm11541Q8C4D8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm11541Q8C4D8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm11541Q8C4D8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11541Q8C4D8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm11541Q8C4D8 AA386476-201ENSMUST00000098781 1665 ntBASIC17.11■□□□□ 0.33
Gm11541Q8C4D8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11541Q8C4D8 Smad6-203ENSMUST00000179458 273 ntBASIC17.11■□□□□ 0.33
Gm11541Q8C4D8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Gm11541Q8C4D8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11541Q8C4D8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11541Q8C4D8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm11541Q8C4D8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11541Q8C4D8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Gm11541Q8C4D8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm11541Q8C4D8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11541Q8C4D8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Gm11541Q8C4D8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11541Q8C4D8 Gm26833-201ENSMUST00000180899 440 ntBASIC17.08■□□□□ 0.32
Gm11541Q8C4D8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Gm11541Q8C4D8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11541Q8C4D8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11541Q8C4D8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11541Q8C4D8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11541Q8C4D8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms