Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nop53Q8BK35 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nop53Q8BK35 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nop53Q8BK35 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nop53Q8BK35 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nop53Q8BK35 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nop53Q8BK35 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nop53Q8BK35 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nop53Q8BK35 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nop53Q8BK35 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nop53Q8BK35 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nop53Q8BK35 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nop53Q8BK35 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nop53Q8BK35 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Nop53Q8BK35 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nop53Q8BK35 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nop53Q8BK35 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nop53Q8BK35 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nop53Q8BK35 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nop53Q8BK35 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nop53Q8BK35 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.39■□□□□ 0.86
Nop53Q8BK35 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nop53Q8BK35 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nop53Q8BK35 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nop53Q8BK35 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nop53Q8BK35 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.39■□□□□ 0.85
Nop53Q8BK35 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nop53Q8BK35 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nop53Q8BK35 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nop53Q8BK35 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nop53Q8BK35 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Nop53Q8BK35 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Nop53Q8BK35 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.37■□□□□ 0.85
Nop53Q8BK35 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nop53Q8BK35 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nop53Q8BK35 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nop53Q8BK35 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nop53Q8BK35 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.37■□□□□ 0.85
Nop53Q8BK35 Gm45417-201ENSMUST00000209533 758 ntBASIC20.37■□□□□ 0.85
Nop53Q8BK35 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nop53Q8BK35 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Nop53Q8BK35 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nop53Q8BK35 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nop53Q8BK35 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nop53Q8BK35 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.36■□□□□ 0.85
Nop53Q8BK35 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.36■□□□□ 0.85
Nop53Q8BK35 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nop53Q8BK35 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nop53Q8BK35 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nop53Q8BK35 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms