Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Rtl1Q7M732 Gm12441-201ENSMUST00000121806 588 ntBASIC34.4■■■■□ 3.1
Rtl1Q7M732 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC34.4■■■■□ 3.1
Rtl1Q7M732 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Rtl1Q7M732 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Rtl1Q7M732 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
Rtl1Q7M732 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC34.39■■■■□ 3.1
Rtl1Q7M732 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC34.39■■■■□ 3.1
Rtl1Q7M732 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Rtl1Q7M732 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Rtl1Q7M732 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Rtl1Q7M732 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Rtl1Q7M732 Gm7290-201ENSMUST00000104990 617 ntBASIC34.38■■■■□ 3.09
Rtl1Q7M732 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Rtl1Q7M732 Gm12918-201ENSMUST00000120234 636 ntBASIC34.38■■■■□ 3.09
Rtl1Q7M732 Gm15710-201ENSMUST00000121821 636 ntBASIC34.38■■■■□ 3.09
Rtl1Q7M732 Gm5075-201ENSMUST00000196916 622 ntBASIC34.38■■■■□ 3.09
Rtl1Q7M732 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC34.38■■■■□ 3.09
Rtl1Q7M732 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC34.38■■■■□ 3.09
Rtl1Q7M732 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Rtl1Q7M732 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Rtl1Q7M732 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC34.38■■■■□ 3.09
Rtl1Q7M732 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Rtl1Q7M732 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC34.38■■■■□ 3.09
Rtl1Q7M732 Gm10616-201ENSMUST00000205285 2127 ntBASIC34.38■■■■□ 3.09
Rtl1Q7M732 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC34.37■■■■□ 3.09
Rtl1Q7M732 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Rtl1Q7M732 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Rtl1Q7M732 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Rtl1Q7M732 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC34.37■■■■□ 3.09
Rtl1Q7M732 Gm4968-201ENSMUST00000071458 858 ntBASIC34.37■■■■□ 3.09
Rtl1Q7M732 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Rtl1Q7M732 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC34.36■■■■□ 3.09
Rtl1Q7M732 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Rtl1Q7M732 Gm18688-201ENSMUST00000204695 1859 ntBASIC34.36■■■■□ 3.09
Rtl1Q7M732 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Rtl1Q7M732 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Rtl1Q7M732 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Rtl1Q7M732 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC34.35■■■■□ 3.09
Rtl1Q7M732 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC34.35■■■■□ 3.09
Rtl1Q7M732 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Rtl1Q7M732 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Rtl1Q7M732 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Rtl1Q7M732 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Rtl1Q7M732 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC34.34■■■■□ 3.09
Rtl1Q7M732 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC34.34■■■■□ 3.09
Rtl1Q7M732 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Rtl1Q7M732 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Rtl1Q7M732 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC34.33■■■■□ 3.09
Rtl1Q7M732 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC34.33■■■■□ 3.09
Rtl1Q7M732 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Rtl1Q7M732 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC34.33■■■■□ 3.09
Rtl1Q7M732 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Rtl1Q7M732 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Rtl1Q7M732 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC34.33■■■■□ 3.09
Rtl1Q7M732 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC34.33■■■■□ 3.09
Rtl1Q7M732 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
Rtl1Q7M732 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Rtl1Q7M732 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Rtl1Q7M732 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC34.32■■■■□ 3.08
Rtl1Q7M732 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Rtl1Q7M732 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Rtl1Q7M732 Gm10602-201ENSMUST00000098239 609 ntBASIC34.31■■■■□ 3.08
Rtl1Q7M732 Gm5540-201ENSMUST00000131852 1848 ntBASIC34.31■■■■□ 3.08
Rtl1Q7M732 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC34.31■■■■□ 3.08
Rtl1Q7M732 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Rtl1Q7M732 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Rtl1Q7M732 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC34.3■■■■□ 3.08
Rtl1Q7M732 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rtl1Q7M732 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rtl1Q7M732 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rtl1Q7M732 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rtl1Q7M732 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rtl1Q7M732 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rtl1Q7M732 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
Rtl1Q7M732 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
Rtl1Q7M732 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
Rtl1Q7M732 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC34.27■■■■□ 3.08
Rtl1Q7M732 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC34.27■■■■□ 3.08
Rtl1Q7M732 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Rtl1Q7M732 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC34.27■■■■□ 3.08
Rtl1Q7M732 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
Rtl1Q7M732 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Rtl1Q7M732 Gm5408-201ENSMUST00000197998 747 ntBASIC34.27■■■■□ 3.08
Rtl1Q7M732 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Rtl1Q7M732 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
Rtl1Q7M732 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC34.26■■■■□ 3.08
Rtl1Q7M732 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC34.26■■■■□ 3.08
Rtl1Q7M732 Gm43545-201ENSMUST00000196765 2779 ntBASIC34.26■■■■□ 3.08
Rtl1Q7M732 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC34.26■■■■□ 3.08
Rtl1Q7M732 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.07
Rtl1Q7M732 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.07
Rtl1Q7M732 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.07
Rtl1Q7M732 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
Rtl1Q7M732 Spcs1-207ENSMUST00000228767 1008 ntBASIC34.25■■■■□ 3.07
Rtl1Q7M732 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Rtl1Q7M732 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Rtl1Q7M732 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07
Rtl1Q7M732 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC34.24■■■■□ 3.07
Rtl1Q7M732 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms