Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
R3hdm4Q4VBF2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
R3hdm4Q4VBF2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3hdm4Q4VBF2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
R3hdm4Q4VBF2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
R3hdm4Q4VBF2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
R3hdm4Q4VBF2 Gm26571-201ENSMUST00000181399 666 ntBASIC20.69■□□□□ 0.9
R3hdm4Q4VBF2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.69■□□□□ 0.9
R3hdm4Q4VBF2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
R3hdm4Q4VBF2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Gm42642-201ENSMUST00000200683 355 ntBASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Gm10033-202ENSMUST00000211874 928 ntBASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
R3hdm4Q4VBF2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Gm13234-201ENSMUST00000120010 747 ntBASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
R3hdm4Q4VBF2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
R3hdm4Q4VBF2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm4Q4VBF2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
R3hdm4Q4VBF2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm4Q4VBF2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm4Q4VBF2 Gm42778-201ENSMUST00000199644 553 ntBASIC20.65■□□□□ 0.9
R3hdm4Q4VBF2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm4Q4VBF2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm4Q4VBF2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
R3hdm4Q4VBF2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
R3hdm4Q4VBF2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
R3hdm4Q4VBF2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.64■□□□□ 0.89
R3hdm4Q4VBF2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.64■□□□□ 0.89
R3hdm4Q4VBF2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.64■□□□□ 0.89
R3hdm4Q4VBF2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
R3hdm4Q4VBF2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm4Q4VBF2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
R3hdm4Q4VBF2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm4Q4VBF2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm4Q4VBF2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
R3hdm4Q4VBF2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.63■□□□□ 0.89
R3hdm4Q4VBF2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm4Q4VBF2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.63■□□□□ 0.89
R3hdm4Q4VBF2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm4Q4VBF2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
R3hdm4Q4VBF2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm4Q4VBF2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm4Q4VBF2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm4Q4VBF2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm4Q4VBF2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.62■□□□□ 0.89
R3hdm4Q4VBF2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm4Q4VBF2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm4Q4VBF2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm4Q4VBF2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
R3hdm4Q4VBF2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm4Q4VBF2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm4Q4VBF2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm4Q4VBF2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm4Q4VBF2 Gm13146-201ENSMUST00000118508 780 ntBASIC20.61■□□□□ 0.89
R3hdm4Q4VBF2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm4Q4VBF2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm4Q4VBF2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
R3hdm4Q4VBF2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3hdm4Q4VBF2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3hdm4Q4VBF2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3hdm4Q4VBF2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
R3hdm4Q4VBF2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
R3hdm4Q4VBF2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm4Q4VBF2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm4Q4VBF2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm4Q4VBF2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
R3hdm4Q4VBF2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms