Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Gm15039-201ENSMUST00000118914 875 ntBASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim43aQ3TL54 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim43aQ3TL54 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim43aQ3TL54 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43aQ3TL54 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43aQ3TL54 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43aQ3TL54 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.21■□□□□ 0.83
Trim43aQ3TL54 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.21■□□□□ 0.83
Trim43aQ3TL54 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trim43aQ3TL54 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43aQ3TL54 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43aQ3TL54 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43aQ3TL54 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim43aQ3TL54 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim43aQ3TL54 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim43aQ3TL54 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43aQ3TL54 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim43aQ3TL54 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43aQ3TL54 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim43aQ3TL54 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43aQ3TL54 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43aQ3TL54 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43aQ3TL54 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43aQ3TL54 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim43aQ3TL54 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43aQ3TL54 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43aQ3TL54 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.18■□□□□ 0.82
Trim43aQ3TL54 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43aQ3TL54 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim43aQ3TL54 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim43aQ3TL54 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.18■□□□□ 0.82
Trim43aQ3TL54 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43aQ3TL54 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim43aQ3TL54 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trim43aQ3TL54 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.17■□□□□ 0.82
Trim43aQ3TL54 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43aQ3TL54 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.17■□□□□ 0.82
Trim43aQ3TL54 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43aQ3TL54 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Trim43aQ3TL54 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43aQ3TL54 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43aQ3TL54 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim43aQ3TL54 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43aQ3TL54 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim43aQ3TL54 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trim43aQ3TL54 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms