Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col10a1Q05306 Gm9988-201ENSMUST00000069786 435 ntBASIC17.61■□□□□ 0.41
Col10a1Q05306 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col10a1Q05306 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col10a1Q05306 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Col10a1Q05306 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col10a1Q05306 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col10a1Q05306 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col10a1Q05306 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col10a1Q05306 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.6■□□□□ 0.41
Col10a1Q05306 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col10a1Q05306 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.6■□□□□ 0.41
Col10a1Q05306 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col10a1Q05306 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col10a1Q05306 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.6■□□□□ 0.41
Col10a1Q05306 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col10a1Q05306 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.6■□□□□ 0.41
Col10a1Q05306 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col10a1Q05306 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Col10a1Q05306 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Col10a1Q05306 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col10a1Q05306 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.59■□□□□ 0.41
Col10a1Q05306 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Col10a1Q05306 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col10a1Q05306 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col10a1Q05306 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col10a1Q05306 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.59■□□□□ 0.41
Col10a1Q05306 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col10a1Q05306 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.59■□□□□ 0.41
Col10a1Q05306 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col10a1Q05306 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col10a1Q05306 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col10a1Q05306 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col10a1Q05306 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col10a1Q05306 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Col10a1Q05306 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Col10a1Q05306 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.58■□□□□ 0.4
Col10a1Q05306 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.58■□□□□ 0.4
Col10a1Q05306 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.58■□□□□ 0.4
Col10a1Q05306 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.58■□□□□ 0.4
Col10a1Q05306 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col10a1Q05306 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col10a1Q05306 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col10a1Q05306 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col10a1Q05306 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col10a1Q05306 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col10a1Q05306 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col10a1Q05306 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col10a1Q05306 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col10a1Q05306 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col10a1Q05306 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col10a1Q05306 Gm10493-201ENSMUST00000097270 612 ntBASIC17.57■□□□□ 0.4
Col10a1Q05306 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col10a1Q05306 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col10a1Q05306 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col10a1Q05306 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col10a1Q05306 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Col10a1Q05306 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col10a1Q05306 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col10a1Q05306 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Col10a1Q05306 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.55■□□□□ 0.4
Col10a1Q05306 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.55■□□□□ 0.4
Col10a1Q05306 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Col10a1Q05306 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.55■□□□□ 0.4
Col10a1Q05306 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col10a1Q05306 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.54■□□□□ 0.4
Col10a1Q05306 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col10a1Q05306 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col10a1Q05306 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col10a1Q05306 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col10a1Q05306 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col10a1Q05306 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Col10a1Q05306 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col10a1Q05306 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col10a1Q05306 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.54■□□□□ 0.4
Col10a1Q05306 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.54■□□□□ 0.4
Col10a1Q05306 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.54■□□□□ 0.4
Col10a1Q05306 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.54■□□□□ 0.4
Col10a1Q05306 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col10a1Q05306 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.54■□□□□ 0.4
Col10a1Q05306 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col10a1Q05306 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Col10a1Q05306 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Col10a1Q05306 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col10a1Q05306 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col10a1Q05306 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col10a1Q05306 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col10a1Q05306 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col10a1Q05306 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms