Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NclP09405 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NclP09405 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
NclP09405 Gm7290-201ENSMUST00000104990 617 ntBASIC28.38■■■□□ 2.13
NclP09405 Gm12918-201ENSMUST00000120234 636 ntBASIC28.38■■■□□ 2.13
NclP09405 Gm15710-201ENSMUST00000121821 636 ntBASIC28.38■■■□□ 2.13
NclP09405 Gm5075-201ENSMUST00000196916 622 ntBASIC28.38■■■□□ 2.13
NclP09405 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC28.38■■■□□ 2.13
NclP09405 AC112142.1-201ENSMUST00000228796 918 ntBASIC28.38■■■□□ 2.13
NclP09405 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC28.38■■■□□ 2.13
NclP09405 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC28.38■■■□□ 2.13
NclP09405 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
NclP09405 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NclP09405 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
NclP09405 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC28.37■■■□□ 2.13
NclP09405 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC28.37■■■□□ 2.13
NclP09405 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NclP09405 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NclP09405 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC28.37■■■□□ 2.13
NclP09405 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NclP09405 Gm6365-201ENSMUST00000054711 744 ntBASIC28.37■■■□□ 2.13
NclP09405 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
NclP09405 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
NclP09405 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NclP09405 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NclP09405 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NclP09405 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
NclP09405 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC28.36■■■□□ 2.13
NclP09405 Nespas-201ENSMUST00000143738 1083 ntBASIC28.36■■■□□ 2.13
NclP09405 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC28.36■■■□□ 2.13
NclP09405 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NclP09405 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
NclP09405 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
NclP09405 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
NclP09405 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
NclP09405 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NclP09405 Gm20100-201ENSMUST00000209418 2272 ntBASIC28.35■■■□□ 2.13
NclP09405 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC28.34■■■□□ 2.13
NclP09405 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NclP09405 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NclP09405 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC28.34■■■□□ 2.13
NclP09405 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
NclP09405 Gm27011-201ENSMUST00000182352 972 ntBASIC28.34■■■□□ 2.13
NclP09405 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
NclP09405 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
NclP09405 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
NclP09405 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NclP09405 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
NclP09405 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NclP09405 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NclP09405 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
NclP09405 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC28.33■■■□□ 2.13
NclP09405 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NclP09405 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
NclP09405 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
NclP09405 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
NclP09405 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NclP09405 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
NclP09405 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NclP09405 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
NclP09405 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
NclP09405 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NclP09405 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
NclP09405 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NclP09405 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
NclP09405 Gm12669-201ENSMUST00000122162 1009 ntBASIC28.31■■■□□ 2.12
NclP09405 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
NclP09405 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
NclP09405 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
NclP09405 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NclP09405 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
NclP09405 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
NclP09405 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NclP09405 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NclP09405 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NclP09405 Gm27032-201ENSMUST00000183124 1116 ntBASIC28.3■■■□□ 2.12
NclP09405 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NclP09405 Gm3807-201ENSMUST00000193520 1168 ntBASIC28.3■■■□□ 2.12
NclP09405 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NclP09405 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC28.3■■■□□ 2.12
NclP09405 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
NclP09405 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
NclP09405 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC28.29■■■□□ 2.12
NclP09405 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC28.29■■■□□ 2.12
NclP09405 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NclP09405 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NclP09405 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NclP09405 Gm12441-201ENSMUST00000121806 588 ntBASIC28.28■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms