Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnmt3aO88508 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnmt3aO88508 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Dnmt3aO88508 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Dnmt3aO88508 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnmt3aO88508 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnmt3aO88508 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnmt3aO88508 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.15■□□□□ 0.66
Dnmt3aO88508 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Dnmt3aO88508 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Dnmt3aO88508 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.14■□□□□ 0.65
Dnmt3aO88508 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnmt3aO88508 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.13■□□□□ 0.65
Dnmt3aO88508 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnmt3aO88508 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnmt3aO88508 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Dnmt3aO88508 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnmt3aO88508 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnmt3aO88508 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnmt3aO88508 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnmt3aO88508 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnmt3aO88508 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnmt3aO88508 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Dnmt3aO88508 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.12■□□□□ 0.65
Dnmt3aO88508 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.12■□□□□ 0.65
Dnmt3aO88508 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dnmt3aO88508 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.11■□□□□ 0.65
Dnmt3aO88508 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Dnmt3aO88508 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dnmt3aO88508 Gm18284-201ENSMUST00000172604 624 ntBASIC19.1■□□□□ 0.65
Dnmt3aO88508 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.1■□□□□ 0.65
Dnmt3aO88508 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.1■□□□□ 0.65
Dnmt3aO88508 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dnmt3aO88508 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dnmt3aO88508 Gm10493-201ENSMUST00000097270 612 ntBASIC19.1■□□□□ 0.65
Dnmt3aO88508 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
Dnmt3aO88508 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Dnmt3aO88508 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dnmt3aO88508 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dnmt3aO88508 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dnmt3aO88508 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.09■□□□□ 0.65
Dnmt3aO88508 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Dnmt3aO88508 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Dnmt3aO88508 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Dnmt3aO88508 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Dnmt3aO88508 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Dnmt3aO88508 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Dnmt3aO88508 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Dnmt3aO88508 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Dnmt3aO88508 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Dnmt3aO88508 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Dnmt3aO88508 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Dnmt3aO88508 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.07■□□□□ 0.64
Dnmt3aO88508 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms