Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv30A0A0B4J1P1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv30A0A0B4J1P1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv30A0A0B4J1P1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trbv30A0A0B4J1P1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 Gm15039-201ENSMUST00000118914 875 ntBASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv30A0A0B4J1P1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv30A0A0B4J1P1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv30A0A0B4J1P1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv30A0A0B4J1P1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv30A0A0B4J1P1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms