Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.97□□□□□ -0.01
Trbv1A0A0B4J1G7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv1A0A0B4J1G7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv1A0A0B4J1G7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv1A0A0B4J1G7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv1A0A0B4J1G7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv1A0A0B4J1G7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv1A0A0B4J1G7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv1A0A0B4J1G7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv1A0A0B4J1G7 BC021767-201ENSMUST00000126387 1716 ntBASIC14.96□□□□□ -0.01
Trbv1A0A0B4J1G7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.96□□□□□ -0.01
Trbv1A0A0B4J1G7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv1A0A0B4J1G7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv1A0A0B4J1G7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trbv1A0A0B4J1G7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv1A0A0B4J1G7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv1A0A0B4J1G7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv1A0A0B4J1G7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv1A0A0B4J1G7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv1A0A0B4J1G7 Gm14117-201ENSMUST00000122417 843 ntBASIC14.95□□□□□ -0.02
Trbv1A0A0B4J1G7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv1A0A0B4J1G7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trbv1A0A0B4J1G7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv1A0A0B4J1G7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv1A0A0B4J1G7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv1A0A0B4J1G7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv1A0A0B4J1G7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv1A0A0B4J1G7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trbv1A0A0B4J1G7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Gm22238-201ENSMUST00000175222 88 ntBASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.92□□□□□ -0.02
Trbv1A0A0B4J1G7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv1A0A0B4J1G7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv1A0A0B4J1G7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv1A0A0B4J1G7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv1A0A0B4J1G7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv1A0A0B4J1G7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trbv1A0A0B4J1G7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv1A0A0B4J1G7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv1A0A0B4J1G7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv1A0A0B4J1G7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.91□□□□□ -0.02
Trbv1A0A0B4J1G7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms