Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.2■□□□□ 0.02
Trav17A0A075B655 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav17A0A075B655 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav17A0A075B655 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav17A0A075B655 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav17A0A075B655 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav17A0A075B655 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav17A0A075B655 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav17A0A075B655 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav17A0A075B655 BC021767-201ENSMUST00000126387 1716 ntBASIC15.19■□□□□ 0.02
Trav17A0A075B655 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav17A0A075B655 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav17A0A075B655 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav17A0A075B655 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.18■□□□□ 0.02
Trav17A0A075B655 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav17A0A075B655 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav17A0A075B655 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav17A0A075B655 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav17A0A075B655 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav17A0A075B655 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.16■□□□□ 0.02
Trav17A0A075B655 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.16■□□□□ 0.02
Trav17A0A075B655 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.16■□□□□ 0.02
Trav17A0A075B655 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav17A0A075B655 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav17A0A075B655 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav17A0A075B655 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav17A0A075B655 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms