Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5493S4R2D1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm5493S4R2D1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5493S4R2D1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5493S4R2D1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm5493S4R2D1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.19■□□□□ 0.98
Gm5493S4R2D1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm5493S4R2D1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm5493S4R2D1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Gm5493S4R2D1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Gm5493S4R2D1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm5493S4R2D1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm5493S4R2D1 Mipep-204ENSMUST00000225043 1548 ntBASIC21.14■□□□□ 0.97
Gm5493S4R2D1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm5493S4R2D1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Gm5493S4R2D1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Gm5493S4R2D1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm5493S4R2D1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.11■□□□□ 0.97
Gm5493S4R2D1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm5493S4R2D1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Gm5493S4R2D1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm5493S4R2D1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Gm5493S4R2D1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm5493S4R2D1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5493S4R2D1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm5493S4R2D1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5493S4R2D1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm5493S4R2D1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Gm5493S4R2D1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Gm5493S4R2D1 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.06■□□□□ 0.96
Gm5493S4R2D1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Gm5493S4R2D1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5493S4R2D1 Rab21-202ENSMUST00000218831 843 ntBASIC21.04■□□□□ 0.96
Gm5493S4R2D1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5493S4R2D1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5493S4R2D1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.03■□□□□ 0.96
Gm5493S4R2D1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5493S4R2D1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm5493S4R2D1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Gm5493S4R2D1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5493S4R2D1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Gm5493S4R2D1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm5493S4R2D1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm5493S4R2D1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm5493S4R2D1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5493S4R2D1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5493S4R2D1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5493S4R2D1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5493S4R2D1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Gm5493S4R2D1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm5493S4R2D1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Gm5493S4R2D1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5493S4R2D1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm5493S4R2D1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Gm5493S4R2D1 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.94■□□□□ 0.94
Gm5493S4R2D1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.94■□□□□ 0.94
Gm5493S4R2D1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5493S4R2D1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Gm5493S4R2D1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm5493S4R2D1 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.93■□□□□ 0.94
Gm5493S4R2D1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.93■□□□□ 0.94
Gm5493S4R2D1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Gm5493S4R2D1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5493S4R2D1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.92■□□□□ 0.94
Gm5493S4R2D1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Gm5493S4R2D1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm5493S4R2D1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm5493S4R2D1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5493S4R2D1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5493S4R2D1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5493S4R2D1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5493S4R2D1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm5493S4R2D1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm5493S4R2D1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm5493S4R2D1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Gm5493S4R2D1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm5493S4R2D1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm5493S4R2D1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm5493S4R2D1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Gm5493S4R2D1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm5493S4R2D1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Gm5493S4R2D1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.85■□□□□ 0.93
Gm5493S4R2D1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5493S4R2D1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.85■□□□□ 0.93
Gm5493S4R2D1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5493S4R2D1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm5493S4R2D1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5493S4R2D1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5493S4R2D1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5493S4R2D1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5493S4R2D1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5493S4R2D1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5493S4R2D1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5493S4R2D1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5493S4R2D1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5493S4R2D1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.8■□□□□ 0.92
Gm5493S4R2D1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Gm5493S4R2D1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm5493S4R2D1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm5493S4R2D1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms