Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rbfox1Q9JJ43 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rbfox1Q9JJ43 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rbfox1Q9JJ43 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.51■■□□□ 1.03
Rbfox1Q9JJ43 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Rbfox1Q9JJ43 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.5■■□□□ 1.03
Rbfox1Q9JJ43 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Rbfox1Q9JJ43 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rbfox1Q9JJ43 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rbfox1Q9JJ43 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rbfox1Q9JJ43 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.48■■□□□ 1.03
Rbfox1Q9JJ43 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Rbfox1Q9JJ43 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rbfox1Q9JJ43 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rbfox1Q9JJ43 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rbfox1Q9JJ43 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Rbfox1Q9JJ43 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rbfox1Q9JJ43 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rbfox1Q9JJ43 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rbfox1Q9JJ43 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rbfox1Q9JJ43 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rbfox1Q9JJ43 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rbfox1Q9JJ43 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rbfox1Q9JJ43 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rbfox1Q9JJ43 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.41■■□□□ 1.02
Rbfox1Q9JJ43 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rbfox1Q9JJ43 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Rbfox1Q9JJ43 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rbfox1Q9JJ43 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rbfox1Q9JJ43 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rbfox1Q9JJ43 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rbfox1Q9JJ43 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rbfox1Q9JJ43 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rbfox1Q9JJ43 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.35■■□□□ 1.01
Rbfox1Q9JJ43 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rbfox1Q9JJ43 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rbfox1Q9JJ43 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rbfox1Q9JJ43 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rbfox1Q9JJ43 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rbfox1Q9JJ43 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rbfox1Q9JJ43 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rbfox1Q9JJ43 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rbfox1Q9JJ43 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.3■■□□□ 1
Rbfox1Q9JJ43 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.29■■□□□ 1
Rbfox1Q9JJ43 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rbfox1Q9JJ43 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rbfox1Q9JJ43 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rbfox1Q9JJ43 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rbfox1Q9JJ43 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rbfox1Q9JJ43 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rbfox1Q9JJ43 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Rbfox1Q9JJ43 Peli2-204ENSMUST00000226513 1320 ntBASIC21.26■□□□□ 0.99
Rbfox1Q9JJ43 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
Rbfox1Q9JJ43 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rbfox1Q9JJ43 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rbfox1Q9JJ43 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rbfox1Q9JJ43 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rbfox1Q9JJ43 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rbfox1Q9JJ43 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.23■□□□□ 0.99
Rbfox1Q9JJ43 Gm26115-201ENSMUST00000175605 87 ntBASIC21.23■□□□□ 0.99
Rbfox1Q9JJ43 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rbfox1Q9JJ43 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rbfox1Q9JJ43 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rbfox1Q9JJ43 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rbfox1Q9JJ43 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rbfox1Q9JJ43 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.22■□□□□ 0.99
Rbfox1Q9JJ43 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rbfox1Q9JJ43 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rbfox1Q9JJ43 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rbfox1Q9JJ43 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rbfox1Q9JJ43 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rbfox1Q9JJ43 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rbfox1Q9JJ43 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rbfox1Q9JJ43 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rbfox1Q9JJ43 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rbfox1Q9JJ43 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rbfox1Q9JJ43 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rbfox1Q9JJ43 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.15■□□□□ 0.98
Rbfox1Q9JJ43 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rbfox1Q9JJ43 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rbfox1Q9JJ43 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Rbfox1Q9JJ43 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Rbfox1Q9JJ43 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbfox1Q9JJ43 Gm8109-201ENSMUST00000194076 746 ntBASIC21.13■□□□□ 0.97
Rbfox1Q9JJ43 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbfox1Q9JJ43 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rbfox1Q9JJ43 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rbfox1Q9JJ43 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rbfox1Q9JJ43 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rbfox1Q9JJ43 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rbfox1Q9JJ43 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rbfox1Q9JJ43 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.11■□□□□ 0.97
Rbfox1Q9JJ43 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rbfox1Q9JJ43 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.1■□□□□ 0.97
Rbfox1Q9JJ43 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbfox1Q9JJ43 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rbfox1Q9JJ43 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rbfox1Q9JJ43 Amer2-203ENSMUST00000225247 2662 ntBASIC21.08■□□□□ 0.97
Rbfox1Q9JJ43 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rbfox1Q9JJ43 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms