Protein–RNA interactions for Protein: Q9ESP1

Sdf2l1, Stromal cell-derived factor 2-like protein 1, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf2l1Q9ESP1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdf2l1Q9ESP1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdf2l1Q9ESP1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdf2l1Q9ESP1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf2l1Q9ESP1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdf2l1Q9ESP1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sdf2l1Q9ESP1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sdf2l1Q9ESP1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sdf2l1Q9ESP1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sdf2l1Q9ESP1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdf2l1Q9ESP1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.41■□□□□ 0.86
Sdf2l1Q9ESP1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdf2l1Q9ESP1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sdf2l1Q9ESP1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdf2l1Q9ESP1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sdf2l1Q9ESP1 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.39■□□□□ 0.86
Sdf2l1Q9ESP1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.39■□□□□ 0.85
Sdf2l1Q9ESP1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sdf2l1Q9ESP1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdf2l1Q9ESP1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.37■□□□□ 0.85
Sdf2l1Q9ESP1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdf2l1Q9ESP1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.35■□□□□ 0.85
Sdf2l1Q9ESP1 Mipep-204ENSMUST00000225043 1548 ntBASIC20.35■□□□□ 0.85
Sdf2l1Q9ESP1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sdf2l1Q9ESP1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.34■□□□□ 0.85
Sdf2l1Q9ESP1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.34■□□□□ 0.85
Sdf2l1Q9ESP1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdf2l1Q9ESP1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdf2l1Q9ESP1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdf2l1Q9ESP1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdf2l1Q9ESP1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdf2l1Q9ESP1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Sdf2l1Q9ESP1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.32■□□□□ 0.84
Sdf2l1Q9ESP1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdf2l1Q9ESP1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdf2l1Q9ESP1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdf2l1Q9ESP1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sdf2l1Q9ESP1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sdf2l1Q9ESP1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdf2l1Q9ESP1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdf2l1Q9ESP1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sdf2l1Q9ESP1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sdf2l1Q9ESP1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sdf2l1Q9ESP1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sdf2l1Q9ESP1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdf2l1Q9ESP1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sdf2l1Q9ESP1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Sdf2l1Q9ESP1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.25■□□□□ 0.83
Sdf2l1Q9ESP1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdf2l1Q9ESP1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdf2l1Q9ESP1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdf2l1Q9ESP1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sdf2l1Q9ESP1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdf2l1Q9ESP1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdf2l1Q9ESP1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sdf2l1Q9ESP1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdf2l1Q9ESP1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Sdf2l1Q9ESP1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Sdf2l1Q9ESP1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Sdf2l1Q9ESP1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.22■□□□□ 0.83
Sdf2l1Q9ESP1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sdf2l1Q9ESP1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sdf2l1Q9ESP1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdf2l1Q9ESP1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdf2l1Q9ESP1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdf2l1Q9ESP1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdf2l1Q9ESP1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdf2l1Q9ESP1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdf2l1Q9ESP1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdf2l1Q9ESP1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sdf2l1Q9ESP1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdf2l1Q9ESP1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sdf2l1Q9ESP1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdf2l1Q9ESP1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sdf2l1Q9ESP1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sdf2l1Q9ESP1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sdf2l1Q9ESP1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sdf2l1Q9ESP1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdf2l1Q9ESP1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sdf2l1Q9ESP1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sdf2l1Q9ESP1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sdf2l1Q9ESP1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf2l1Q9ESP1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf2l1Q9ESP1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdf2l1Q9ESP1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.11■□□□□ 0.81
Sdf2l1Q9ESP1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdf2l1Q9ESP1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdf2l1Q9ESP1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdf2l1Q9ESP1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sdf2l1Q9ESP1 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.08■□□□□ 0.81
Sdf2l1Q9ESP1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sdf2l1Q9ESP1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sdf2l1Q9ESP1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Sdf2l1Q9ESP1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sdf2l1Q9ESP1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdf2l1Q9ESP1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Sdf2l1Q9ESP1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdf2l1Q9ESP1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sdf2l1Q9ESP1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sdf2l1Q9ESP1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms