Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Lime1Q9EQR5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lime1Q9EQR5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lime1Q9EQR5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lime1Q9EQR5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lime1Q9EQR5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
Lime1Q9EQR5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Lime1Q9EQR5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lime1Q9EQR5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.24■■□□□ 1.15
Lime1Q9EQR5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Lime1Q9EQR5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.23■■□□□ 1.15
Lime1Q9EQR5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lime1Q9EQR5 Amer2-203ENSMUST00000225247 2662 ntBASIC22.23■■□□□ 1.15
Lime1Q9EQR5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Lime1Q9EQR5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lime1Q9EQR5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Lime1Q9EQR5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Lime1Q9EQR5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
Lime1Q9EQR5 Gm27322-201ENSMUST00000184007 104 ntBASIC22.2■■□□□ 1.14
Lime1Q9EQR5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Lime1Q9EQR5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lime1Q9EQR5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.19■■□□□ 1.14
Lime1Q9EQR5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.19■■□□□ 1.14
Lime1Q9EQR5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lime1Q9EQR5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lime1Q9EQR5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Lime1Q9EQR5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lime1Q9EQR5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Lime1Q9EQR5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Lime1Q9EQR5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lime1Q9EQR5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lime1Q9EQR5 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.14■■□□□ 1.14
Lime1Q9EQR5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
Lime1Q9EQR5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lime1Q9EQR5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Lime1Q9EQR5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lime1Q9EQR5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lime1Q9EQR5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Lime1Q9EQR5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.09■■□□□ 1.13
Lime1Q9EQR5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.08■■□□□ 1.13
Lime1Q9EQR5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lime1Q9EQR5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Lime1Q9EQR5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lime1Q9EQR5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lime1Q9EQR5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.07■■□□□ 1.12
Lime1Q9EQR5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lime1Q9EQR5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lime1Q9EQR5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lime1Q9EQR5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lime1Q9EQR5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.06■■□□□ 1.12
Lime1Q9EQR5 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.06■■□□□ 1.12
Lime1Q9EQR5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lime1Q9EQR5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lime1Q9EQR5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Lime1Q9EQR5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lime1Q9EQR5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lime1Q9EQR5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lime1Q9EQR5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22■■□□□ 1.11
Lime1Q9EQR5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lime1Q9EQR5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22■■□□□ 1.11
Lime1Q9EQR5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lime1Q9EQR5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22■■□□□ 1.11
Lime1Q9EQR5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Lime1Q9EQR5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lime1Q9EQR5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lime1Q9EQR5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lime1Q9EQR5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lime1Q9EQR5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lime1Q9EQR5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lime1Q9EQR5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lime1Q9EQR5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Lime1Q9EQR5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lime1Q9EQR5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.94■■□□□ 1.1
Lime1Q9EQR5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.91■■□□□ 1.1
Lime1Q9EQR5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lime1Q9EQR5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lime1Q9EQR5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lime1Q9EQR5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lime1Q9EQR5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lime1Q9EQR5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lime1Q9EQR5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lime1Q9EQR5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lime1Q9EQR5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Lime1Q9EQR5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lime1Q9EQR5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lime1Q9EQR5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lime1Q9EQR5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lime1Q9EQR5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lime1Q9EQR5 Peli2-204ENSMUST00000226513 1320 ntBASIC21.85■■□□□ 1.09
Lime1Q9EQR5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Lime1Q9EQR5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lime1Q9EQR5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lime1Q9EQR5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Lime1Q9EQR5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.84■■□□□ 1.09
Lime1Q9EQR5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lime1Q9EQR5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.84■■□□□ 1.09
Lime1Q9EQR5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lime1Q9EQR5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lime1Q9EQR5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Lime1Q9EQR5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms