Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ssmem1Q9D9Y8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ssmem1Q9D9Y8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ssmem1Q9D9Y8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ssmem1Q9D9Y8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ssmem1Q9D9Y8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22■■□□□ 1.11
Ssmem1Q9D9Y8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Ssmem1Q9D9Y8 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.99■■□□□ 1.11
Ssmem1Q9D9Y8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
Ssmem1Q9D9Y8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ssmem1Q9D9Y8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ssmem1Q9D9Y8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ssmem1Q9D9Y8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ssmem1Q9D9Y8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ssmem1Q9D9Y8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssmem1Q9D9Y8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ssmem1Q9D9Y8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ssmem1Q9D9Y8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ssmem1Q9D9Y8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ssmem1Q9D9Y8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ssmem1Q9D9Y8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ssmem1Q9D9Y8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ssmem1Q9D9Y8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ssmem1Q9D9Y8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ssmem1Q9D9Y8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ssmem1Q9D9Y8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ssmem1Q9D9Y8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ssmem1Q9D9Y8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ssmem1Q9D9Y8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ssmem1Q9D9Y8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ssmem1Q9D9Y8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ssmem1Q9D9Y8 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.8■■□□□ 1.08
Ssmem1Q9D9Y8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.8■■□□□ 1.08
Ssmem1Q9D9Y8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssmem1Q9D9Y8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssmem1Q9D9Y8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssmem1Q9D9Y8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ssmem1Q9D9Y8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.78■■□□□ 1.08
Ssmem1Q9D9Y8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ssmem1Q9D9Y8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ssmem1Q9D9Y8 Gm9397-201ENSMUST00000200125 605 ntBASIC21.77■■□□□ 1.08
Ssmem1Q9D9Y8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.07
Ssmem1Q9D9Y8 Gm45855-201ENSMUST00000212546 880 ntBASIC21.76■■□□□ 1.07
Ssmem1Q9D9Y8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Ssmem1Q9D9Y8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssmem1Q9D9Y8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.75■■□□□ 1.07
Ssmem1Q9D9Y8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ssmem1Q9D9Y8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ssmem1Q9D9Y8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ssmem1Q9D9Y8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ssmem1Q9D9Y8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ssmem1Q9D9Y8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Ssmem1Q9D9Y8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ssmem1Q9D9Y8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ssmem1Q9D9Y8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.7■■□□□ 1.06
Ssmem1Q9D9Y8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ssmem1Q9D9Y8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ssmem1Q9D9Y8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ssmem1Q9D9Y8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ssmem1Q9D9Y8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ssmem1Q9D9Y8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ssmem1Q9D9Y8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.65■■□□□ 1.06
Ssmem1Q9D9Y8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ssmem1Q9D9Y8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ssmem1Q9D9Y8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ssmem1Q9D9Y8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ssmem1Q9D9Y8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
Ssmem1Q9D9Y8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssmem1Q9D9Y8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssmem1Q9D9Y8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.63■■□□□ 1.05
Ssmem1Q9D9Y8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssmem1Q9D9Y8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.62■■□□□ 1.05
Ssmem1Q9D9Y8 Gm24970-201ENSMUST00000175582 82 ntBASIC21.62■■□□□ 1.05
Ssmem1Q9D9Y8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.62■■□□□ 1.05
Ssmem1Q9D9Y8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.62■■□□□ 1.05
Ssmem1Q9D9Y8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ssmem1Q9D9Y8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ssmem1Q9D9Y8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ssmem1Q9D9Y8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ssmem1Q9D9Y8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.6■■□□□ 1.05
Ssmem1Q9D9Y8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ssmem1Q9D9Y8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ssmem1Q9D9Y8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Ssmem1Q9D9Y8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ssmem1Q9D9Y8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Ssmem1Q9D9Y8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssmem1Q9D9Y8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssmem1Q9D9Y8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ssmem1Q9D9Y8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.56■■□□□ 1.04
Ssmem1Q9D9Y8 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.55■■□□□ 1.04
Ssmem1Q9D9Y8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ssmem1Q9D9Y8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ssmem1Q9D9Y8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssmem1Q9D9Y8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssmem1Q9D9Y8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.54■■□□□ 1.04
Ssmem1Q9D9Y8 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.54■■□□□ 1.04
Ssmem1Q9D9Y8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssmem1Q9D9Y8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssmem1Q9D9Y8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Ssmem1Q9D9Y8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms