Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Mbd3l1Q9D9H3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.92■■□□□ 1.1
Mbd3l1Q9D9H3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Mbd3l1Q9D9H3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Mbd3l1Q9D9H3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Mbd3l1Q9D9H3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Mbd3l1Q9D9H3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Mbd3l1Q9D9H3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Mbd3l1Q9D9H3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Mbd3l1Q9D9H3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Mbd3l1Q9D9H3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mbd3l1Q9D9H3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mbd3l1Q9D9H3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Mbd3l1Q9D9H3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mbd3l1Q9D9H3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mbd3l1Q9D9H3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Mbd3l1Q9D9H3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mbd3l1Q9D9H3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Mbd3l1Q9D9H3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Mbd3l1Q9D9H3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Mbd3l1Q9D9H3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Mbd3l1Q9D9H3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Mbd3l1Q9D9H3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Mbd3l1Q9D9H3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.81■■□□□ 1.08
Mbd3l1Q9D9H3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Mbd3l1Q9D9H3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Mbd3l1Q9D9H3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mbd3l1Q9D9H3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.78■■□□□ 1.08
Mbd3l1Q9D9H3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mbd3l1Q9D9H3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mbd3l1Q9D9H3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.77■■□□□ 1.08
Mbd3l1Q9D9H3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Mbd3l1Q9D9H3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mbd3l1Q9D9H3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Mbd3l1Q9D9H3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mbd3l1Q9D9H3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mbd3l1Q9D9H3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mbd3l1Q9D9H3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Mbd3l1Q9D9H3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mbd3l1Q9D9H3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mbd3l1Q9D9H3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mbd3l1Q9D9H3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mbd3l1Q9D9H3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mbd3l1Q9D9H3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mbd3l1Q9D9H3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mbd3l1Q9D9H3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.66■■□□□ 1.06
Mbd3l1Q9D9H3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mbd3l1Q9D9H3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.66■■□□□ 1.06
Mbd3l1Q9D9H3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mbd3l1Q9D9H3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mbd3l1Q9D9H3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mbd3l1Q9D9H3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Mbd3l1Q9D9H3 Gm24109-201ENSMUST00000175489 103 ntBASIC21.62■■□□□ 1.05
Mbd3l1Q9D9H3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Mbd3l1Q9D9H3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Mbd3l1Q9D9H3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Mbd3l1Q9D9H3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Mbd3l1Q9D9H3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mbd3l1Q9D9H3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mbd3l1Q9D9H3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mbd3l1Q9D9H3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mbd3l1Q9D9H3 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.58■■□□□ 1.05
Mbd3l1Q9D9H3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Mbd3l1Q9D9H3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Mbd3l1Q9D9H3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.57■■□□□ 1.04
Mbd3l1Q9D9H3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Mbd3l1Q9D9H3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mbd3l1Q9D9H3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Mbd3l1Q9D9H3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Mbd3l1Q9D9H3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mbd3l1Q9D9H3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mbd3l1Q9D9H3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mbd3l1Q9D9H3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mbd3l1Q9D9H3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mbd3l1Q9D9H3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mbd3l1Q9D9H3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mbd3l1Q9D9H3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mbd3l1Q9D9H3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Mbd3l1Q9D9H3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Mbd3l1Q9D9H3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mbd3l1Q9D9H3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.52■■□□□ 1.04
Mbd3l1Q9D9H3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mbd3l1Q9D9H3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mbd3l1Q9D9H3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mbd3l1Q9D9H3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mbd3l1Q9D9H3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mbd3l1Q9D9H3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Mbd3l1Q9D9H3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mbd3l1Q9D9H3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mbd3l1Q9D9H3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Mbd3l1Q9D9H3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mbd3l1Q9D9H3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mbd3l1Q9D9H3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Mbd3l1Q9D9H3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms