Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Mbd3l1Q9D9H3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.92■■□□□ 1.1
Mbd3l1Q9D9H3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Mbd3l1Q9D9H3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Mbd3l1Q9D9H3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Mbd3l1Q9D9H3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Mbd3l1Q9D9H3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Mbd3l1Q9D9H3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Mbd3l1Q9D9H3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Mbd3l1Q9D9H3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Mbd3l1Q9D9H3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mbd3l1Q9D9H3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mbd3l1Q9D9H3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Mbd3l1Q9D9H3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Mbd3l1Q9D9H3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mbd3l1Q9D9H3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Mbd3l1Q9D9H3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mbd3l1Q9D9H3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Mbd3l1Q9D9H3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Mbd3l1Q9D9H3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Mbd3l1Q9D9H3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Mbd3l1Q9D9H3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Mbd3l1Q9D9H3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Mbd3l1Q9D9H3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.81■■□□□ 1.08
Mbd3l1Q9D9H3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Mbd3l1Q9D9H3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Mbd3l1Q9D9H3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Mbd3l1Q9D9H3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mbd3l1Q9D9H3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.78■■□□□ 1.08
Mbd3l1Q9D9H3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mbd3l1Q9D9H3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mbd3l1Q9D9H3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.77■■□□□ 1.08
Mbd3l1Q9D9H3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Mbd3l1Q9D9H3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mbd3l1Q9D9H3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Mbd3l1Q9D9H3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mbd3l1Q9D9H3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mbd3l1Q9D9H3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mbd3l1Q9D9H3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Mbd3l1Q9D9H3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mbd3l1Q9D9H3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mbd3l1Q9D9H3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mbd3l1Q9D9H3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mbd3l1Q9D9H3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mbd3l1Q9D9H3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mbd3l1Q9D9H3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mbd3l1Q9D9H3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.66■■□□□ 1.06
Mbd3l1Q9D9H3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mbd3l1Q9D9H3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.66■■□□□ 1.06
Mbd3l1Q9D9H3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mbd3l1Q9D9H3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mbd3l1Q9D9H3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mbd3l1Q9D9H3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Mbd3l1Q9D9H3 Gm24109-201ENSMUST00000175489 103 ntBASIC21.62■■□□□ 1.05
Mbd3l1Q9D9H3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Mbd3l1Q9D9H3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Mbd3l1Q9D9H3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Mbd3l1Q9D9H3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Mbd3l1Q9D9H3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mbd3l1Q9D9H3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mbd3l1Q9D9H3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mbd3l1Q9D9H3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mbd3l1Q9D9H3 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.58■■□□□ 1.05
Mbd3l1Q9D9H3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Mbd3l1Q9D9H3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Mbd3l1Q9D9H3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.57■■□□□ 1.04
Mbd3l1Q9D9H3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Mbd3l1Q9D9H3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mbd3l1Q9D9H3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Mbd3l1Q9D9H3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Mbd3l1Q9D9H3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mbd3l1Q9D9H3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mbd3l1Q9D9H3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mbd3l1Q9D9H3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mbd3l1Q9D9H3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mbd3l1Q9D9H3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mbd3l1Q9D9H3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mbd3l1Q9D9H3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Mbd3l1Q9D9H3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Mbd3l1Q9D9H3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Mbd3l1Q9D9H3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mbd3l1Q9D9H3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.52■■□□□ 1.04
Mbd3l1Q9D9H3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mbd3l1Q9D9H3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mbd3l1Q9D9H3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mbd3l1Q9D9H3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Mbd3l1Q9D9H3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mbd3l1Q9D9H3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Mbd3l1Q9D9H3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Mbd3l1Q9D9H3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mbd3l1Q9D9H3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Mbd3l1Q9D9H3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mbd3l1Q9D9H3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mbd3l1Q9D9H3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Mbd3l1Q9D9H3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms