Protein–RNA interactions for Protein: Q9D7V2

Lysmd2, LysM and putative peptidoglycan-binding domain-containing protein 2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd2Q9D7V2 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.85■□□□□ 0.93
Lysmd2Q9D7V2 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.85■□□□□ 0.93
Lysmd2Q9D7V2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Lysmd2Q9D7V2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Lysmd2Q9D7V2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lysmd2Q9D7V2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lysmd2Q9D7V2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.83■□□□□ 0.93
Lysmd2Q9D7V2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd2Q9D7V2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lysmd2Q9D7V2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd2Q9D7V2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lysmd2Q9D7V2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lysmd2Q9D7V2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lysmd2Q9D7V2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lysmd2Q9D7V2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lysmd2Q9D7V2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd2Q9D7V2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd2Q9D7V2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.78■□□□□ 0.92
Lysmd2Q9D7V2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd2Q9D7V2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Lysmd2Q9D7V2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd2Q9D7V2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd2Q9D7V2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd2Q9D7V2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd2Q9D7V2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd2Q9D7V2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lysmd2Q9D7V2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lysmd2Q9D7V2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lysmd2Q9D7V2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.74■□□□□ 0.91
Lysmd2Q9D7V2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lysmd2Q9D7V2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.73■□□□□ 0.91
Lysmd2Q9D7V2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lysmd2Q9D7V2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lysmd2Q9D7V2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.71■□□□□ 0.91
Lysmd2Q9D7V2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Lysmd2Q9D7V2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd2Q9D7V2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Lysmd2Q9D7V2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd2Q9D7V2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.68■□□□□ 0.9
Lysmd2Q9D7V2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.67■□□□□ 0.9
Lysmd2Q9D7V2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd2Q9D7V2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd2Q9D7V2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd2Q9D7V2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd2Q9D7V2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lysmd2Q9D7V2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd2Q9D7V2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd2Q9D7V2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd2Q9D7V2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd2Q9D7V2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd2Q9D7V2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd2Q9D7V2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd2Q9D7V2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd2Q9D7V2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd2Q9D7V2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd2Q9D7V2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd2Q9D7V2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd2Q9D7V2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd2Q9D7V2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd2Q9D7V2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd2Q9D7V2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Lysmd2Q9D7V2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd2Q9D7V2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd2Q9D7V2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd2Q9D7V2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.59■□□□□ 0.89
Lysmd2Q9D7V2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.59■□□□□ 0.89
Lysmd2Q9D7V2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd2Q9D7V2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd2Q9D7V2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd2Q9D7V2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.58■□□□□ 0.88
Lysmd2Q9D7V2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd2Q9D7V2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd2Q9D7V2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd2Q9D7V2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lysmd2Q9D7V2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lysmd2Q9D7V2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd2Q9D7V2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Lysmd2Q9D7V2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd2Q9D7V2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd2Q9D7V2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd2Q9D7V2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lysmd2Q9D7V2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd2Q9D7V2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd2Q9D7V2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd2Q9D7V2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lysmd2Q9D7V2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd2Q9D7V2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd2Q9D7V2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd2Q9D7V2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd2Q9D7V2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Lysmd2Q9D7V2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd2Q9D7V2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd2Q9D7V2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd2Q9D7V2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Lysmd2Q9D7V2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd2Q9D7V2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd2Q9D7V2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd2Q9D7V2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd2Q9D7V2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd2Q9D7V2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms