Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.65■■■□□ 2.18
Chd1lQ9CXF7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.64■■■□□ 2.17
Chd1lQ9CXF7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Chd1lQ9CXF7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Chd1lQ9CXF7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Chd1lQ9CXF7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Chd1lQ9CXF7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Chd1lQ9CXF7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
Chd1lQ9CXF7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
Chd1lQ9CXF7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Chd1lQ9CXF7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Chd1lQ9CXF7 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.58■■■□□ 2.16
Chd1lQ9CXF7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Chd1lQ9CXF7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Chd1lQ9CXF7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Chd1lQ9CXF7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Chd1lQ9CXF7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Chd1lQ9CXF7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.54■■■□□ 2.16
Chd1lQ9CXF7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Chd1lQ9CXF7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Chd1lQ9CXF7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Chd1lQ9CXF7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Chd1lQ9CXF7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Chd1lQ9CXF7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Chd1lQ9CXF7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.49■■■□□ 2.15
Chd1lQ9CXF7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Chd1lQ9CXF7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Chd1lQ9CXF7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Chd1lQ9CXF7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Chd1lQ9CXF7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Chd1lQ9CXF7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Chd1lQ9CXF7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Chd1lQ9CXF7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC28.43■■■□□ 2.14
Chd1lQ9CXF7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Chd1lQ9CXF7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Chd1lQ9CXF7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
Chd1lQ9CXF7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.42■■■□□ 2.14
Chd1lQ9CXF7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Chd1lQ9CXF7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Chd1lQ9CXF7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.41■■■□□ 2.14
Chd1lQ9CXF7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Chd1lQ9CXF7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.39■■■□□ 2.14
Chd1lQ9CXF7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Chd1lQ9CXF7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Chd1lQ9CXF7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Chd1lQ9CXF7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Chd1lQ9CXF7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Chd1lQ9CXF7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Chd1lQ9CXF7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Chd1lQ9CXF7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Chd1lQ9CXF7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Chd1lQ9CXF7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Chd1lQ9CXF7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Chd1lQ9CXF7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Chd1lQ9CXF7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Chd1lQ9CXF7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Chd1lQ9CXF7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Chd1lQ9CXF7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Chd1lQ9CXF7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
Chd1lQ9CXF7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Chd1lQ9CXF7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Chd1lQ9CXF7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Chd1lQ9CXF7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Chd1lQ9CXF7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
Chd1lQ9CXF7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.26■■■□□ 2.11
Chd1lQ9CXF7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Chd1lQ9CXF7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Chd1lQ9CXF7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Chd1lQ9CXF7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.23■■■□□ 2.11
Chd1lQ9CXF7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Chd1lQ9CXF7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Chd1lQ9CXF7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Chd1lQ9CXF7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Chd1lQ9CXF7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Chd1lQ9CXF7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.11
Chd1lQ9CXF7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Chd1lQ9CXF7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Chd1lQ9CXF7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Chd1lQ9CXF7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Chd1lQ9CXF7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Chd1lQ9CXF7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Chd1lQ9CXF7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Chd1lQ9CXF7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Chd1lQ9CXF7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Chd1lQ9CXF7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Chd1lQ9CXF7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Chd1lQ9CXF7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Chd1lQ9CXF7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.13■■■□□ 2.09
Chd1lQ9CXF7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Chd1lQ9CXF7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Chd1lQ9CXF7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Chd1lQ9CXF7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Chd1lQ9CXF7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Chd1lQ9CXF7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.11■■■□□ 2.09
Chd1lQ9CXF7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Chd1lQ9CXF7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Chd1lQ9CXF7 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.1■■■□□ 2.09
Chd1lQ9CXF7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Chd1lQ9CXF7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.08■■■□□ 2.09
Chd1lQ9CXF7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms