Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chchd1Q9CQA6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Chchd1Q9CQA6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chchd1Q9CQA6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chchd1Q9CQA6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chchd1Q9CQA6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chchd1Q9CQA6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.12■□□□□ 0.65
Chchd1Q9CQA6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chchd1Q9CQA6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chchd1Q9CQA6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chchd1Q9CQA6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chchd1Q9CQA6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chchd1Q9CQA6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chchd1Q9CQA6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chchd1Q9CQA6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chchd1Q9CQA6 Gm24109-201ENSMUST00000175489 103 ntBASIC19.08■□□□□ 0.64
Chchd1Q9CQA6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chchd1Q9CQA6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chchd1Q9CQA6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chchd1Q9CQA6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Chchd1Q9CQA6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chchd1Q9CQA6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chchd1Q9CQA6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.03■□□□□ 0.64
Chchd1Q9CQA6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chchd1Q9CQA6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chchd1Q9CQA6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chchd1Q9CQA6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chchd1Q9CQA6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chchd1Q9CQA6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chchd1Q9CQA6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chchd1Q9CQA6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Chchd1Q9CQA6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chchd1Q9CQA6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chchd1Q9CQA6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chchd1Q9CQA6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chchd1Q9CQA6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chchd1Q9CQA6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chchd1Q9CQA6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Chchd1Q9CQA6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chchd1Q9CQA6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chchd1Q9CQA6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chchd1Q9CQA6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chchd1Q9CQA6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Chchd1Q9CQA6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chchd1Q9CQA6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chchd1Q9CQA6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chchd1Q9CQA6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chchd1Q9CQA6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chchd1Q9CQA6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chchd1Q9CQA6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.92■□□□□ 0.62
Chchd1Q9CQA6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chchd1Q9CQA6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chchd1Q9CQA6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chchd1Q9CQA6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chchd1Q9CQA6 Gm23366-201ENSMUST00000175022 89 ntBASIC18.9■□□□□ 0.62
Chchd1Q9CQA6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chchd1Q9CQA6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.87■□□□□ 0.61
Chchd1Q9CQA6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chchd1Q9CQA6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chchd1Q9CQA6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chchd1Q9CQA6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chchd1Q9CQA6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chchd1Q9CQA6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chchd1Q9CQA6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chchd1Q9CQA6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chchd1Q9CQA6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.84■□□□□ 0.61
Chchd1Q9CQA6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chchd1Q9CQA6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chchd1Q9CQA6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chchd1Q9CQA6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chchd1Q9CQA6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chchd1Q9CQA6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chchd1Q9CQA6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Chchd1Q9CQA6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chchd1Q9CQA6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.8■□□□□ 0.6
Chchd1Q9CQA6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Chchd1Q9CQA6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Chchd1Q9CQA6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chchd1Q9CQA6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chchd1Q9CQA6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chchd1Q9CQA6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Chchd1Q9CQA6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chchd1Q9CQA6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chchd1Q9CQA6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chchd1Q9CQA6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.75■□□□□ 0.59
Chchd1Q9CQA6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.75■□□□□ 0.59
Chchd1Q9CQA6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chchd1Q9CQA6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chchd1Q9CQA6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.75■□□□□ 0.59
Chchd1Q9CQA6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chchd1Q9CQA6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Chchd1Q9CQA6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chchd1Q9CQA6 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.74■□□□□ 0.59
Chchd1Q9CQA6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chchd1Q9CQA6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chchd1Q9CQA6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chchd1Q9CQA6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chchd1Q9CQA6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chchd1Q9CQA6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chchd1Q9CQA6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms